Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq89 118 2e-21 >seq89 Length=3091062 Score = 118 bits (130), Expect = 2e-21 Identities = 288/432 (67%), Gaps = 11/432 (3%) Strand=Plus/Minus Query 150398 TTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATC 150457 ||| ||||||||||||||||||||||||| || | ||| || ||||||||| || Sbjct 3083268 TTAATTGGTGAACCAGGTGTTGGTAAAACTGCTATTGCTGAAGGCTTAGCACAAGCAATT 3083209 Query 150458 GCTAATGGTGATGTTCCAGATTCTATGAAAGATGT---TGAAATTCTTTCTTTGAATATG 150514 | |||| || || || || | | |||| | || ||| || || ||||| Sbjct 3083208 GTTAATAACGAAGTACCTGAAACACTTAAAGGTAAACGTGTAATG---TCATTAGATATG 3083152 Query 150515 GGTGCATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTG 150574 || || || |||||| || || ||||||||||| || ||||| || | | || | Sbjct 3083151 GGGACAGTTGTTGCTGGAACAAAATATCGTGGTGAGTTTGAAGAGCGCTTGAAAAAAGTA 3083092 Query 150575 CTACAAGAACTAAAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCCATACTATT 150634 | ||||| | | || | |||| | | || ||||| ||| | || || | Sbjct 3083091 ATGGAAGAAATTCATCAAGCTGGAAATGTAGTGTTATTTATCGACGAATTACACACACTA 3083032 Query 150635 ATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCT 150694 | ||||| |||| || | ||| || | ||| || || | ||||| || Sbjct 3083031 GTAGGTGCAGGTGG---TGCAGAAGGTGCTATTGATGCATCTAACATTCTTAAACCAGCA 3082975 Query 150695 CTATCTCGCGGTGAAATTCG-TGTCATCGGTGCAACAACCTACGATGAATATCGTAAACA 150753 || ||||||||||| | | ||| ||||||||||| || | |||||||| |||||| | Sbjct 3082974 TTAGCTCGCGGTGAATTACAATGT-ATCGGTGCAACTACTTTAGATGAATACCGTAAAAA 3082916 Query 150754 CATTGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACCGAC 150813 ||||||||||||||||| || | ||||||||| ||| | ||| ||| || || Sbjct 3082915 TATTGAAAAAGATGCAGCGCTTGAACGTCGTTTCCAACCTGTTCAAGTTGGTGAGCCAAC 3082856 Query 150814 ACTTGAAGAAAC 150825 ||||||| || Sbjct 3082855 TGTTGAAGATAC 3082844 Score = 87.8 bits (96), Expect = 4e-12 Identities = 156/229 (68%), Gaps = 9/229 (4%) Strand=Plus/Plus Query 73711 TTGAGTTTTTGCGTGATTACGGTAAATGCTTCACTGTGAATAATATGATGAACAAAGAAT 73770 |||| || || |||||||| |||||| | ||||||| | ||| | ||||| | Sbjct 1602071 TTGATTTCTTACGTGATTATGGTAAACATGTAGGTGTGAATTACATGTTAGCTAAAGATT 1602130 Query 73771 CTGTACGTTCACGTATTGAACGCGATGAACAAGGTATTTCTTTCACTGAATTTTCGTATC 73830 || | | ||||| | |||| || ||||||| || || |||||| | ||| Sbjct 1602131 CTATTCAAACACGTTTAGAACACG---------GTATTTCATTTACAGAATTTACCTATA 1602181 Query 73831 AAATTCTTCAAGCAATGGACTTTGAATATTTGTACGAAATGAATAACTGCAAAATCCAAA 73890 ||| | ||||| || ||||| | |||| | ||| |||| || ||||| ||| Sbjct 1602182 CAATATTACAAGCGATTGACTTCGGTCATTTAAATAAAACATATAATTGTAAAATTCAAG 1602241 Query 73891 TTGGTGGTTCTGACCAATGGGGTAATATGATTGCTGGAATTGATTTGAT 73939 |||||||||| ||||||||||| ||||| | || ||||| ||||| Sbjct 1602242 TTGGTGGTTCAGACCAATGGGGAAATATTACGAGCGGTATTGAATTGAT 1602290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147569785690196