Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq105 105 1e-17 >seq105 Length=1502237 Score = 105 bits (116), Expect = 1e-17 Identities = 291/439 (66%), Gaps = 9/439 (2%) Strand=Plus/Minus Query 221747 GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGA 221806 ||||| | || || |||||||| || ||||| || || ||||| |||| | | || Sbjct 285626 GTATATTCTACTATTTCTGTACAAAGATTGCTACATTTAATGGTGCCCAAATTCTGTTGG 285567 Query 221807 TTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGA 221866 || || || | ||| || || ||||| ||||| | ||| | || || |||| |||| Sbjct 285566 TTGGATTTTCTGTTGCACGCATCTTTGTACAGCATGTAAGGAACACCGGTTTCCACCTGA 285507 Query 221867 GCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACC--GTCCTCTTGACTGCACCCT 221924 | | | | || | ||| | | ||| ||| ||| ||| | | | | ||| | Sbjct 285506 GACTCAATTATAGCATTCCACAAGTTTCTTGCG-TCAATTTGTCGTATATAACG-ACCTT 285449 Query 221925 CGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGC 221984 || |||||||| ||| || ||||| |||| ||| | | || | || | Sbjct 285448 CG---TTTTCATATTTTACATACAGATCCTCAAAGTTTTTACCCCAGACGTCATGAAGAC 285392 Query 221985 CTGGACACCTG-GCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATG 222043 | ||||| | ||||| ||||| |||||||| | ||| || || ||||| | |||| Sbjct 285391 CAGGACATTTATGCGGG-CACATAAGACTCCATTTCTTATTAGATTCAACCCTTTCCATG 285333 Query 222044 AAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCG 222103 || | || || ||||| || || | ||| ||||| | || ||| ||| ||| || Sbjct 285332 AACAAATCAGGAATCCAAAGTGCATAAAAAAGATCACGGGCCCGTACCTCTTCCTTTCCA 285273 Query 222104 TTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACG 222163 | ||||| ||| ||| | |||||||||||| ||||| ||||| ||||| || || | Sbjct 285272 GTATTTTTTTTCAAATCGAGAAACTCAAAAATATCAGCATGCCAAGGCTCGAGGTAAATT 285213 Query 222164 GCCAGAGCGCCGGGTCGCT 222182 || | ||| || |||| || Sbjct 285212 GCAAAAGCACCTGGTCTCT 285194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928828521994880