Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019513.1 Length=45552 Score E Sequences producing significant alignments: (Bits) Value seq89 80.6 8e-11 >seq89 Length=3091062 Score = 80.6 bits (88), Expect = 8e-11 Identities = 164/240 (68%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 20226 ATTATCAAACGTATATTCTGCAAATCAGGTAAAGCGTCAACTTGGACATATGAAAGAAGC 20285 |||||| || | ||||| | ||| || || | || |||||| |||||||| |||| Sbjct 2303475 ATTATCTAAAATTTATTCAGAAAACCAAGTTATACGACAACTTAATGATATGAAAAAAGC 2303534 Query 20286 TATTAAATACGCCGTTAAATTTTACAATTATCCAAACGAACACATATTAAATAGCGTCAC 20345 | | ||| || |||||||| | || | || | || || |||||| || Sbjct 2303535 TTTAGCATATGCAACGAAATTTTATAGATACACTAATAAGCATATGTTAAATGATGTAGA 2303594 Query 20346 ACTACCAAAGAAGAGTAAGACGATAGAAGATATAGAAAAAGAAGAAGCGAAAATGTACAA 20405 | ||| ||||| ||| || |||||||||| |||||||||||| ||||| || || Sbjct 2303595 AGTACTTAAGAAAGCTAAAACTCTAGAAGATATTGAAAAAGAAGAA--AAAAATATATAA 2303652 Query 20406 CTATTTAGAGATGGAACAGGTAATACAGATACGCGATTTTATACTGAACGATAATAACAT 20465 |||| | || ||| || || || | ||||| || |||||| | ||| | || ||||| Sbjct 2303653 CTATCTTGAAATGATTCAAGTGTTAAAAATACGTGAATTTATA-TTAACTA-AAAAACAT 2303710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145642375196136