Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq89 158 2e-33 >seq89 Length=3091062 Score = 158 bits (174), Expect = 2e-33 Identities = 358/528 (68%), Gaps = 24/528 (5%) Strand=Plus/Minus Query 173169 ATGGGTGGAGGTGTATCGTTTAACGTATCTAAATTACGTGCACGTGGTGAAGCTATTAAA 173228 || || || ||||| | |||| |||||||||| || |||||||||||||| |||||| Sbjct 2803418 ATTGGCGGCGGTGTTGCTATTAATTTATCTAAATTGCGCGCACGTGGTGAAGCGATTAAA 2803359 Query 173229 GGAATCGACGGAAGAGCTTCAGGTGTTTTACCAGTAATG-AAAATC-CTTGAAGATGCTT 173286 || || | || || ||| || | ||||| || |||||| ||||||| || | Sbjct 2803358 GGTATAAAAGGCGTTGCCAAAGGCGTACTTCCAGT--TGCAAAATCACTTGAAGGTGGCT 2803301 Query 173287 TTTCATATGCTAATCAATTAGGACAACGTCCAGGTGCTGGAGCTGCTTATATCAATATCT 173346 || ||||| ||||| | ||||||||||| ||||| || || | ||| | ||||| | Sbjct 2803300 TTAGCTATGCAGATCAACTTGGACAACGTCCTGGTGCGGGTGCAGTATATTTAAATATTT 2803241 Query 173347 TCCATTCAGATGTTGAAGAATTTCTAGATTCTAAGAAAATCAACGCTGACGAAAAATCAC 173406 |||| | ||||||||||| ||| ||||| | || ||| | |||||||| ||| | | || Sbjct 2803240 TCCACTATGATGTTGAAGAGTTTTTAGATACGAAAAAAGTAAACGCTGATGAAGATTTAC 2803181 Query 173407 GTCTTAAATCGCTTTCGTTAGGTGTTATCGTTCCTGACAAATTCATGGAATTAGC-TGAG 173465 || | | |||| ||| | || || || || ||| | || | || || Sbjct 2803180 GTTTGTCTACAATTTCAACAGGATTAATTGTGCCATCTAAGTTCTTTGATCTTGCAAAAG 2803121 Query 173466 AAGGATGAACCATTT---TATGTTTTCTATCCATATACAGTTAAGAAAGAATACGGTAAA 173522 |||| || |||| ||||||| | || ||||| || | ||||||||||| Sbjct 2803120 AAGG--CAAAGATTTCCATATGTTTGC--GCCTCATACAATTTATAAAGAATACGGCGTC 2803065 Query 173523 CATCTAGATGATTTGGATATCGATACAATGTATTCC---GAATTAGTTTCTAATCCTAAT 173579 | |||||||| | | | ||| | |||| | ||| | ||| |||| || ||| Sbjct 2803064 ACTTTAGATGATATTAACTTAGATGAA---TATTACGATGAACTTGTTGCTAACCCAAAT 2803008 Query 173580 GTTAAGAAACGTAAGTTAAATGCTAGACGT---ATGTTAACTAAGATTGCACAAGTTCAG 173636 ||| | ||| ||| ||| | | |||| ||| | | || |||||||||| || Sbjct 2803007 GTTGATAAA---AAGAAAAAAGATGCACGTGAAATGCTGAATATGATTGCACAAACACAA 2802951 Query 173637 AAAGAATCAGGTTATCCATATTTCTTCTTGAAAACTAATGCTAACGAA 173684 | ||||||||||||||||||| | || ||| |||||| ||| || Sbjct 2802950 TTACAATCAGGTTATCCATATTTAATGTTTAAAGATAATGCAAACAAA 2802903 Score = 138 bits (152), Expect = 2e-27 Identities = 416/624 (67%), Gaps = 30/624 (5%) Strand=Plus/Minus Query 174435 TCTGTTGGATTAGGTGCTATGAATTTACATGGTTATCTTGCACAAAATGAAATCATGTTC 174494 || || |||||||||| |||||| ||||||| || | || ||||| |||| | Sbjct 2802623 TCAGTAGGATTAGGTGTAATGAATCTACATGGCTACTTAGCTAAAAATAAAATTGGTTAT 2802564 Query 174495 GAATCTGATGAAGCTTTAGATTTCGTTAATGTATTCTTCGGAATGGTAAATTACTATTC- 174553 |||||||| ||||| |||||||| || | ||||| ||| | || || ||||| Sbjct 2802563 GAATCTGAAGAAGCGAAAGATTTCGCAAACATTTTCTTTATGATGATGAACTATTATTCC 2802504 Query 174554 ATTGAAACGTTCCATGGAAATTAGTAGAGAACGTGATTGTGACACTTTCGAAGGATTT-G 174612 |||||| ||||| ||||||||| || |||| | | || | | | || || || | Sbjct 2802503 ATTGAA-CGTTCAATGGAAATTGCTAAAGAAAGACAA---GA-AGTATATAAAGACTTCG 2802449 Query 174613 ATGAATCTGAATATGGAAATGGTAAGTACTTTGACAGATACATAGATAACTTCAA-TCTA 174671 | ||||||| || | ||| |||||||||||||| || | || | |||| || | | Sbjct 2802448 AAAAATCTGATTACGCAAACGGTAAGTACTTTGA---ATTC-TATACAACTCAAACTTTT 2802393 Query 174672 GAACCTAAATTCGATAAAACTAGTGAGTTATTCGAAGGTATCGAAATTCCAAGTTTACAA 174731 ||| | |||| || ||| | || | ||||| |||||| | || |||||| || Sbjct 2802392 GAAGCGAAATATGAAAAAGTTCGTAAATTATTTGAAGGTTTTGATGTTCCAACAGCTGAA 2802333 Query 174732 GATTGGGTTGACTTAAAGGATGATGTAATGAATTAC--GGTATCTATCATGCATATCGTT 174789 |||||| | ||| | | || || ||| || || | | ||||||||||||| Sbjct 2802332 GATTGGAAAGCTTTACAAAAAGAAGT--GGAAGCACATGGCCTATTCCATGCATATCGTT 2802275 Query 174790 TAGCTATTGCACCTAACCAGTCAACAGCTTACATTATGT-CA----GCCACTCCTTCGAT 174844 |||| |||||||||| || ||| || || ||||| || || ||| ||| | Sbjct 2802274 TAGCAATTGCACCTA--CA--CAAAGTATTTCA-TATGTACAAAATGCAACTAGTTCAGT 2802220 Query 174845 AATGCCAATATCTGATCAAGTTGAAGTACGTGAATATGATCATTCGACAACCTTTTATCC 174904 |||||||| ||| ||| ||||| ||| |||| | | | ||| || ||||| Sbjct 2802219 TATGCCAATTGTTGACCAAATTGAACGCCGTACTTATGGTAACGCAGAAACATTCTATCC 2802160 Query 174905 TATGCC--TGGAATGAACGATGATAACATGTTCTTCTATAAATCAGCATACGATATGGAT 174962 ||||| | || | | || | |||| | |||||| || |||| ||| ||| Sbjct 2802159 AATGCCATTCTTATCACC--AGAGACAATGTGGTACTATAAGTCTGCATTTAATACAGAT 2802102 Query 174963 CAGTTTAAGGTATTACGTTTAGTATCAGTTATTCAACGTCATATCGATCAAGGAATTTCA 175022 || | || || || |||| | ||| ||||||| ||| | |||||||| ||||| Sbjct 2802101 CAAATGAAATTAATAGATTTAATCTCAACTATTCAAACTCACGTGGATCAAGGTATTTCT 2802042 Query 175023 TGTATTTTACATACAAATTCTGAA 175046 |||||| || |||||||||| Sbjct 2802041 ACAATTTTATATGTAAATTCTGAA 2802018 Score = 116 bits (128), Expect = 5e-21 Identities = 263/388 (68%), Gaps = 12/388 (3%) Strand=Plus/Minus Query 179095 GTAATGTTAGAATCATTTCTATTTTATTCTGGATTCTTTTTACCATTATATCTTTCTGGT 179154 ||| | |||||| ||||| |||| || ||||| |||| || |||||||||||| | || Sbjct 2801311 GTATTCTTAGAAACATTTTTATTCTACTCTGGTTTCTATTACCCATTATATCTTGCAGGA 2801252 Query 179155 AACGGTAAGATGAAAGCTTCAGCTGATATCATTAAGAAAATCGTAGCTGATGAATCTATT 179214 | ||||| |||| | || | || ||||| ||||| || |||||||||||| Sbjct 2801251 CAAGGTAAAATGACTACATCTGGAGAAATCATCCGTAAAATATTATTGGATGAATCTATT 2801192 Query 179215 CATGGTGTATTCGTTGGATTACTTGCACAAGAAGTTTAC--AAC--ACTTTCGATGATAC 179270 ||||| ||||| ||| | ||||||| ||||||| || |||||| || | Sbjct 2801191 CATGGCGTATTTACTGGTATGGATGCACAA--AGTTTACGCAATGAACTTTCA--GAAAG 2801136 Query 179271 TACAAAGAAAGAATTAAAAGATGAACTGTTAAGAACTATTTACAG-TTTATACGAAAACG 179329 | ||| || || | | | ||| ||| | || |||| || |||||| ||| | Sbjct 2801135 TGAAAAACAACAAGCAGATCAAGAAATGTATA-AATTATTAGAAGATTTATATAGAAATG 2801077 Query 179330 AAGCTAAGTATACTGATTACATTTATACCGAAGTTGGATTATCTTCAGATGTAAAAGAAT 179389 ||| | ||||| ||| ||||| | |||| ||||| ||||||| | | Sbjct 2801076 AAGTTGCTTATACGCATTCACTTTATGATGCTATTGGTCTATCTGAAGATGTACTTAACT 2801017 Query 179390 ACGTTAAATACAATGCTAATAAAGCTTTGATGAATCTTGGATTCGATCCAGAATTCACAC 179449 | |||| ||| |||| || ||||||||| || | |||||||||||| | ||| | Sbjct 2801016 ATGTTAGATATAATGGCAACAAAGCTTTGTCTAACTTAGGATTCGATCCATATTTCGAAG 2800957 Query 179450 ATGGTGAAATAAATCCAATCGTATTGAA 179477 | ||||| | ||||||||| |||||| Sbjct 2800956 AACGTGAATTTAATCCAATC--ATTGAA 2800931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701850099861440