Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq89 98.7 2e-15 >seq89 Length=3091062 Score = 98.7 bits (108), Expect = 2e-15 Identities = 247/371 (67%), Gaps = 7/371 (2%) Strand=Plus/Minus Query 48365 TGGTGATGCAGGAGTCGGTAAAACTCAGATCGTCGATGGTTTTGCACAAGCCATTGCTGA 48424 |||||| |||| || ||||||||| || | || || || |||||||| |||| | | Sbjct 3083263 TGGTGAACCAGGTGTTGGTAAAACTGCTATTGCTGAAGGCTTAGCACAAGCAATTGTTAA 3083204 Query 48425 TGGTGACGTACCTGACTATCTGAAAGGTGTTGAGGTATTATCTCTTAACGTTTCTG--CT 48482 | || |||||||| || |||||| | || | || || | | | | | | Sbjct 3083203 TAACGAAGTACCTGAAACACTTAAAGGTAA--ACGTGTAATGTCATTAGATATGGGGACA 3083146 Query 48483 GTAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAA 48542 || |||||| |||||||| |||||||| || ||||| || || || | || || Sbjct 3083145 GTTGTTGCTGGAACAAAATATCGTGGTGAGTTTGAAGAGCGCTTGAAAAAAGTAATGGAA 3083086 Query 48543 GAACTTAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGT 48602 ||| || | || | ||||||| | || || || || ||| |||| | | | ||| Sbjct 3083085 GAAATTCATCAAGCTGGAAATGTAGTGTTATTTATCGACGAATTACACACACTAGTAGGT 3083026 Query 48603 GCTGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTCA 48662 || |||||| |||| | || |||| ||| || || | ||||| ||| | | Sbjct 3083025 GCAGGTGGT-GCAGAA--GGTGCTATTGATGCATCTAACATTCTTAAACCAGCATTAGCT 3082969 Query 48663 CGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGAA 48722 || ||||| | | |||||||||||| |||| || ||||| || | || |||||| Sbjct 3082968 CGCGGTGAATTACAATGTATCGGTGCAACTACTTTAGATGAATACCGTAAAAATATTGAA 3082909 Query 48723 AAAGATGCTGC 48733 |||||||| || Sbjct 3082908 AAAGATGCAGC 3082898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106437724563824