Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq157 116 3e-21 >seq157 Length=245904 Score = 116 bits (128), Expect = 3e-21 Identities = 267/399 (67%), Gaps = 10/399 (3%) Strand=Plus/Minus Query 28561 AGGAGTAACTGACAAAGGTTACTTAACAAACTCATTCCACTTAGACGTACTGAAGAAGGT 28620 ||| || || || |||||||||| || ||| || ||| | ||||| ||||||||| Sbjct 52603 AGGCGTGACCGATAAAGGTTACTACACCAACAGCTTTCACCTGGACGTGGAGAAGAAGGT 52544 Query 28621 AAACCCGTATGATAAAATCGACTTTGAA--GCGCAATTCATCCCATACAGCTCCGGTGGT 28678 || || || | ||||||||||||||| || | | || | | || ||| || Sbjct 52543 GAATCCTTACCAGAAAATCGACTTTGAACTGCCCTACCCACCGCTGGCAAA--CGGAGGC 52486 Query 28679 CATATCTGCTACGGGGAATTCCCTAATATGCGCCACAATATTGAAGCACTCGAAAATGTG 28738 || |||||||| || | || || ||| || || | |||| || ||| | || Sbjct 52485 TTCATTTGCTACGGCGAGTATCCGAACCTGCAACATAACCTCAAAGCGCTGGAAGACGTC 52426 Query 28739 TGGGATTACGCCTACACCAAAGTCCCATACTACGGCACCAACACACCAATTGATGAATGC 28798 ||||||||| ||| | | || || || ||||||||||| || || || ||||| || Sbjct 52425 TGGGATTACAGCTATAGCCGTGTGCCCTATTACGGCACCAATACGCCGATCGATGAGTGT 52366 Query 28799 TATAGCTGCGGATTCAAAGGTGAGTTCAATTGTACAAGCAAAGGTTTTGAGTGTCCTAAC 28858 ||| || || |||| ||||| || | || || |||||||| || || || || Sbjct 52365 TATGAGTGTGGCTTCACCGGTGAATTTGAGTGCACCAGCAAAGGCTTCACCTGCCCGAAA 52306 Query 28859 TGCGGAAACCACGACCCAGAGAAATGC---TCTGTCACCAGACGAGTGTGTGGCTACCTA 28915 || || || |||||| | | | || ||||| || | || || |||||||| || Sbjct 52305 TGTGGCAATCACGACTCCG---CACGCGTATCTGTAACGCGTCGGGTATGTGGCTATCTG 52249 Query 28916 GGTAATCCTGGTACTCGTCCATTCAATGCAGGTAAACAG 28954 || | || | | | ||||| || || || || |||||| Sbjct 52248 GGCAGCCCGGATGCACGTCCGTTTAACGCCGGGAAACAG 52210 Score = 105 bits (116), Expect = 5e-18 Identities = 226/338 (67%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 27677 CAGACTCTAGAATACCAAGTAAATACTATTTACTCAACTAATGGTCAGACTCCGTTCTTG 27736 ||| | || ||||| |||||||||| | || | | ||||||||||| |||||| | Sbjct 53485 CAGTCGCTGGAATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGACGCCGTTCGTC 53426 Query 27737 ACATTTGGATTCGGTCTAGGTACTTCTTGGGAAGCTAAACTAGTTCAGAAAGGTATTCTA 27796 || ||||| |||| || || || ||||||| | || | ||| || || || Sbjct 53425 ACCTTTGGTTTCGACCTCGGCACCAGTTGGGAATCGCGTCTGATCCAGCAATCCATCCTG 53366 Query 27797 CAGAATCGTATTGCTGGTCTAGGTAAAGAAGGTACTACTCCGGTATTCCCTAAGCTAGTA 27856 | || |||||||| ||||| || ||| | ||| ||| |||| ||||| || || || Sbjct 53365 CGCAACCGTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCCCAAACTGGTG 53306 Query 27857 TTTGGTCTCAAAGATGGGGTAAACCTGAAGCCAGAAGACCCTAACTACGATATTAAGCAG 27916 || | | || || || || || | ||| | | || || ||||| || || ||||| Sbjct 53305 TTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACATCAAGCAA 53246 Query 27917 CTTGCATTAGAATGTGCTACTGTTCGCATGTATCCAGACATACTTAACTACGATAAGACT 27976 || ||| | || || | | || ||||| || || || || || |||||| || | Sbjct 53245 CTGGCACTGGATTGCTCCAGCAAGCGGATGTACCCGGATATCCTCAATTACGATCAGGTT 53186 Query 27977 GTTGAAATTACAGGCGGATATAAAGCACCTATGGGCTG 28014 ||| | |||| ||| | ||| | || |||||||| Sbjct 53185 GTTAAGGTTACCGGCTCGTTTAAGACGCCCATGGGCTG 53148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356688305207374