Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq157 87.8 5e-13 >seq157 Length=245904 Score = 87.8 bits (96), Expect = 5e-13 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 36268 AGGAAAATTAACAAATGGCACAAGCAAGCTACAGCAAGCCAACACAGCGCGATGTTGATC 36327 ||||| |||||||||||| ||| ||||||||| || |||| | || |||||| Sbjct 39989 AGGAATATTAACAAATGGATAGTACAAACTACAGCAAACCGTCACAACAGGAAATTGATC 40048 Query 36328 GCGCAGAAACAGATTTACTTATCAACCTGTCAACGCTTACCCAGCGCGGTCTGGCAAAGA 36387 | || ||||| || || || |||| ||| || | || ||| |||| | || || Sbjct 40049 GTGCTGAAACGGACTTGCTCATCATCCTTTCCAAACTGACCGGGCGCAAGTTCGCGGAGT 40108 Query 36388 TGATTGGCTGTCATGAATCGAAGATAAGCAGAACGGACTGGCGGTTTATTGCTTCGGTCT 36447 | || |||||||||||||| || || | || |||||||| ||||| || | || | Sbjct 40109 TTGCCGGGTGTCATGAATCGAAAATCAGTCGCACCGACTGGCGCTTTATCGCCACTGTTT 40168 Query 36448 TGTGTG 36453 |||||| Sbjct 40169 TGTGTG 40174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151197482709000