Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019914.1 Length=40071 Score E Sequences producing significant alignments: (Bits) Value seq89 297 5e-76 >seq89 Length=3091062 Score = 297 bits (328), Expect = 5e-76 Identities = 264/329 (80%), Gaps = 1/329 (0%) Strand=Plus/Minus Query 10800 TAAATGATTAACAGAGTCGTATTAGTAGGTCGTTTAACTAAAGATCCTGAATTTAGAAAA 10859 |||||||| || ||||| || ||||| ||||||||||| |||||||| |||| ||||| | Sbjct 140634 TAAATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACA 140575 Query 10860 ACTCAAAGTGGGGTTGATGTTGCAACTTTTACACTAGCAGTTAACCGTACTTTCACGAAT 10919 || | || || |||||| |||||||| |||||||| |||||||| || || ||| Sbjct 140574 ACACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAAT 140515 Query 10920 GCGCAAGGCGAACGTGAAGCAGATTTTATCAATATAGTCGTATTCAGAAAACAAGCACAC 10979 |||||||| ||||| ||||||||||| || ||| ||||| || |||||||||||| | Sbjct 140514 GCGCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGAT 140455 Query 10980 AACGTTAACAACTATTTATCGAAAGGAAAACTAGCAGGTGTTGATGGTCGCATCCAATCA 11039 || || || ||||| || | ||||| | |||| || ||||| |||||||| |||||| Sbjct 140454 AATGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCA 140395 Query 11040 CGCAGTTATGAAAATCAAGAAGGTCGTCGAATATTTGTTACTGAAGTAGTTGCAGATAGT 11099 || || |||||||| |||||||| ||||| | ||||| |||||||||||| ||||| Sbjct 140394 CGTAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGC 140335 Query 11100 GTTCAATTTCTTGAACCTAAAAATTCAAA 11128 |||||||| |||||||||||||| ||||| Sbjct 140334 GTTCAATTCCTTGAACCTAAAAA-TCAAA 140307 Score = 212 bits (234), Expect = 2e-50 Identities = 423/617 (69%), Gaps = 25/617 (4%) Strand=Plus/Minus Query 3010 ATAATCTTCAGATTTTAAGT-CATCTAACTTAATTGTTTTAGTACCTAATTTTTTACCAT 3068 ||||||| ||| | |||||| ||| | ||| ||| ||||||||||||||| ||| || Sbjct 2302911 ATAATCTACAG-TATTAAGTTCATTAATCTTTATTTTTTTAGTACCTAATTCTTTCTTAT 2302853 Query 3069 CAGCACCTTTTGTAGCTTTTAAAACTACATCTTCATCATTTTGTAATTTGTAAGTCATGA 3128 | | ||||||||||||| ||| |||||| ||| || ||||||||| |||| | | Sbjct 2302852 CGCTATCTTTTGTAGCTTTCAAAGTTACATCACCATTATCTTGTAATTTATAAGCGACTA 2302793 Query 3129 TACCTTTTGCAGTTTTACC-CTTTTTAATAGTGTCGTTACTATGTTCGTTCCATTTACCA 3187 | ||||| ||| |||| || ||||| || | || | ||||| | ||| || || Sbjct 2302792 TTCCTTTGGCACTTTTTCCTTTTTTTGATTTTATCTTCTGAATGTTTATCCCAATTTTCA 2302733 Query 3188 AGTTTTCCAGTAGTAGGTGTAATTCCGACATCTAATTTATTTACAGTATTATCACTATCT 3247 | | | || ||| | || ||| ||| | | ||||| || | |||| | | | | Sbjct 2302732 AATATACCTGTATTTGGCGTAGGTCCTAGTTTTAATTGCTTGATTGTATCTTGTTTTTTT 2302673 Query 3248 TGAGTTGCTTCAAAACAAGCAATCCATACATTCATTGA--AGTTATATCTTCGCTATCCG 3305 || | ||| | | || | ||||||||| |||| ||| || || | ||| | Sbjct 2302672 TGTTCTACTTTCATATTAGATAACCATACATT--TTGAGCAGTAATTTCATTTGTATTTG 2302615 Query 3306 ATTTGTTTTTAACATGATACTTGAAAGCTAATAATTTATCTCCTGAATCTTTGTCATTAA 3365 || |||| ||| | ||| || |||||||| || || || || | || ||||||| Sbjct 2302614 TGTTATTTTCAACTTCATATTTAAAAGCTAAAAACTTGTCGCCAGTATTAAGTTCATTAA 2302555 Query 3366 GAATGAAAGTATCATCAATTTTCAATACTGCTTGATCAATAACTAAAGTGTCATTTTCAA 3425 | || || || | ||||| || || | ||| ||| |||||||||||||| || Sbjct 2302554 TTAAAAATGTGTCTTTGATTTTTAAAGCTACACCATCGATAGTTAAAGTGTCATTTTTAA 2302495 Query 3426 ATTGTGGTTTATTTTCATTTACTGATTTTGTTTCGGTATTATTAGACTTTTTACCATCTG 3485 |||||| ||||| | | | ||| |||| | ||| |||| || ||||| || || Sbjct 2302494 ATTGTGATTTATCTGCGTCTACAGATTCTTTTT---TATT------CTCTTTACTAT-TG 2302445 Query 3486 AATTATTATCGTCATTACCACATGCACCTAAAACTAATGTACTAGCTAACAATACACCAA 3545 || ||| ||| |||||||| ||||| ||||||||||| || || |||| ||| | Sbjct 2302444 --TTGTTA---CTATTTCCACATGCTCCTAACACTAATGTACTTGCCAATAATAAACCTA 2302390 Query 3546 AGACttttttcatttttCAAAAAATTCCCTTCGTATTAATTTTTGTGTTCAAACACATGC 3605 | || ||||||||||| | | | ||| || | | | ||||| | || ||||||| | Sbjct 2302389 AAACCTTTTTCATTTT---ACATACTCCTTTATTTTAATTTTTTATATTTAAACACACGT 2302333 Query 3606 AATGGCTCAAATTGAAT 3622 ||||||||||| ||||| Sbjct 2302332 AATGGCTCAAACTGAAT 2302316 Score = 96.9 bits (106), Expect = 9e-16 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 35695 GCTAAAAACGAAGGTTGGACTACTCCTGCTAAAGCTATTATTGGTGGCGCGAAATTCGTT 35754 |||||||| | || |||| ||| | |||||||| |||| ||||| ||||| | Sbjct 2459863 GCTAAAAATAATGGCTGGAATACAGTTAAAAAAGCTATAGTTGGCGGCGCTAAATTTATA 2459922 Query 35755 AGACAAGGTTATATCGATAAAGGTCAACAAACATTATACAGAATGCGTTGGAACCCTCAA 35814 || ||||| |||||||||||| | ||| | || | |||||||||||||||| || Sbjct 2459923 TCTGAATCATATATTGATAAAGGTCAAAATACACTTTATAAAATGCGTTGGAACCCTGAA 2459982 Query 35815 AACCCAGGTACACATCAATATGCTACTGATGTACGTTGGGCGCAACATCAAGCAAATACA 35874 || |||||| || ||||| || || || ||| ||||| ||| | || | | Sbjct 2459983 AATCCAGGTGTTCACCAATACGCAACAGACGTAGCATGGGCCTCTCATAATGCTACTCGT 2460042 Query 35875 ATTAAAAGTTTATATGAT 35892 |||||| |||| |||||| Sbjct 2460043 ATTAAAGGTTTCTATGAT 2460060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128103467201892