Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019915.1 Length=40917 Score E Sequences producing significant alignments: (Bits) Value seq89 116 1e-21 >seq89 Length=3091062 Score = 116 bits (128), Expect = 1e-21 Identities = 370/561 (66%), Gaps = 22/561 (4%) Strand=Plus/Minus Query 1860 ATAATCTACGGACTTTAGTTTGCTAATATCTATTTTCTTGATACCCAGTTTTTTACCCTC 1919 ||||||||| | || |||| |||| | |||||| || |||| | || ||| || Sbjct 2302911 ATAATCTACAGTATTAAGTTCATTAATCTTTATTTTTTTAGTACCTAATTCTTTCTTATC 2302852 Query 1920 TGTGCCTTTAGTAGCTTTAAGTGTCACTTGCTTATCATTTTCTAATTCATAAGTAATAAT 1979 | |||| |||||||| | || || | || || || ||||| ||||| | || Sbjct 2302851 GCTATCTTTTGTAGCTTTCAAAGTTACATCACCATTATCTTGTAATTTATAAGCGACTAT 2302792 Query 1980 ACCTTTAGCAGTTTTACCTTTCTTA-ATTACATCATTGTTGTGTTTGTCCCATTCTTCGA 2038 ||||| ||| |||| ||||| || ||| ||| | ||||| ||||| | ||| | Sbjct 2302791 TCCTTTGGCACTTTTTCCTTTTTTTGATTTTATCTTCTGAATGTTTATCCCAATTTTCAA 2302732 Query 2039 ATTTACCAGTATTAGGCGTTGGACCAACTTCAAGTTTACTTTCAGTATTTTCGCTATCTT 2098 || |||| ||||| ||||| || || | || | || | |||| || | | || Sbjct 2302731 ATATACCTGTATTTGGCGTAGGTCCTAGTTTTAATTGCTTGATTGTATCTTGTTTTTTTT 2302672 Query 2099 GAACGGCTTCCATTGACGCAATCCAAACATTCATTG-GC-GTTATTTG-TTCATCTCCGT 2155 | | ||| ||| | | ||| ||||| ||| || || |||| || | | || Sbjct 2302671 GTTCTACTTTCATATTAGATAACCATACATT--TTGAGCAGTAATTTCATTTGTATTTGT 2302614 Query 2156 CTTTACTTTTAACCTCGTATTTAAATGCTAATAATTTCTTTCCGTTATCCGAATCCTTAT 2215 || | ||| ||| || |||||||| ||||| || || | || ||| | | | Sbjct 2302613 GTT-ATTTTCAACTTCATATTTAAAAGCTAAAAACTTGTCGCCAGTATTA-AGT-----T 2302561 Query 2216 CGTTAACTAAAAATGTGTCTTTTATTTTTAAAACAGCTTGATCAAGAACTAAAGTATCAT 2275 | |||| ||||||||||||||| ||||||||| | | ||| | | |||||| |||| Sbjct 2302560 CATTAATTAAAAATGTGTCTTTGATTTTTAAAGCTACACCATCGATAGTTAAAGTGTCAT 2302501 Query 2276 TAGTGAATTGTACTTTGTTTTCATCAACGGAAGTCGACTTT-TTCGAATTGCTATTGTTG 2334 | | |||||| ||| | | | || || | | || ||| ||| || ||||||||| Sbjct 2302500 TTTTAAATTGTGATTTATCTGCGTCTACAG-ATTCTTTTTTATTCTCTTTACTATTGTTG 2302442 Query 2335 TTACT------ACATGCCGCTAAAACTAAGAAACAAGATAATAAAATAAATAAGACTTTT 2388 ||||| |||||| |||| ||||| || | ||||| | | ||| || ||| Sbjct 2302441 TTACTATTTCCACATGCTCCTAACACTAATGTACTTGCCAATAATAAACCTAAAACCTTT 2302382 Query 2389 TTCATTCTACATTTCTCCTTT 2409 |||||| |||| | ||||||| Sbjct 2302381 TTCATTTTACA-TACTCCTTT 2302362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130810622130396