Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq157 176 9e-40 >seq157 Length=245904 Score = 176 bits (194), Expect = 9e-40 Identities = 288/414 (70%), Gaps = 6/414 (1%) Strand=Plus/Minus Query 27224 CTGCCCCCGATGCGGCCTTTTTCCCGTGCCGCCGCCAGTCCTGCACGGGTACGCTCAACA 27283 || ||||||||||| || | | ||| || || | ||||| | |||||||||||| Sbjct 192613 CTACCCCCGATGCGTCCCCTGCTTCTTGCTGCGGCTAAACCTGCCTGAGTACGCTCAACA 192554 Query 27284 ATCAGCTCGCGCTCCATTTCCGCCAGCGCCCCCATAACATGAAAAAAGAAGCGGCCCATT 27343 || || || |||||||||| |||| ||| | ||| ||||| || || || ||||| Sbjct 192553 ATGAGTTCCCGCTCCATTTGTGCCAACGCGCTCATCACATGGAAGAAAAAACGGCCTGCG 192494 Query 27344 GGCGTACTGGTATCAATGCTGTCGGTCAGGCTGCGGAAGTTTATTCCTTTTTCGCGCAGT 27403 | |||| |||||||||| | || |||| ||| | || | || |||| || |||| Sbjct 192493 GACGTAGAGGTATCAATGGTATCCGTCAAGCTATGAAAATGGATGCCTTCATCTTCCAGT 192434 Query 27404 TCCTCAGTCAGCATAACCAGATGGCGCATGCTGCGGCCAAGACGATCCAGCTTCCACACC 27463 | | | ||| || ||| ||||| || || || | ||| |||||||| ||| Sbjct 192433 TTGGATATTAAAGTAATCAAATGTTTAATGCTTCGACCCAGCCTATCGAGCTTCCAGACC 192374 Query 27464 ACCAGTGTGTCGCCTTCCTGCAGACAGCGCAGTGCTTTTTTCAGTCCCGGCCT---GTCT 27520 |||||||| ||||| | ||| ||| | || ||| | ||| || || |||| Sbjct 192373 ACCAGTGTATCGCCCGATTTCAGGCAGTTTAACGCGCGTTTTAATCCGGGTCTCTGGTCT 192314 Query 27521 GACTTTTTCCCGCTTATTCTGTCTTCAAAAATCAGTTCACAATTTGCGCTCTGCAGCGCG 27580 | |||| || || ||| | || |||||||| | ||||||||||||| || | Sbjct 192313 G---TTTTTCCACTGATTTTATCCTCAAAAATTTGCTCACAATTTGCGCAAATCAAGGAT 192257 Query 27581 TTACGCTGCAAATCAGTGTTCTGGTCATTTGTTGACACCCTGATATAGCCAATC 27634 || |||| ||||| ||||| ||||||||| |||||||||| |||||||| ||| Sbjct 192256 TTTTGCTGTAAATCGGTGTTTTGGTCATTTTTTGACACCCTCATATAGCCTATC 192203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94481626972824