Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_020081.2 Length=149844 Score E Sequences producing significant alignments: (Bits) Value seq89 86.0 6e-12 >seq89 Length=3091062 Score = 86.0 bits (94), Expect = 6e-12 Identities = 202/297 (68%), Gaps = 11/297 (4%) Strand=Plus/Plus Query 137462 ATTAAAAACAACCCACACAGCCGCAGACATATTGTCTCAGCTTGGAACGCAGGAGAAGTA 137521 |||||||| ||||| | || |||||||| | || || ||||| || ||| | Sbjct 2013202 ATTAAAAATAACCCTAATTCTCGTAGACATATCATTTCTGCGTGGAATCCAACTGAAATT 2013261 Query 137522 GA-ACA-TGCTGCCTTACCACCATGTCACACGATGTTCCAATTTTATATCGGTCATGGCA 137579 || ||| || || ||||||||||| || |||||||||||||||||| | |||| | Sbjct 2013262 GATACAATG--GCTTTACCACCATGCCATACGATGTTCCAATTTTATGTTCAAGATGGAA 2013319 Query 137580 ATACATTAAGTTGCAAGATGTATCAAAGATCCGCAGATGCCGCACTTGGAGTACCCTTTA 137639 | ||| |||||| | | ||||| ||| || ||| | || || || |||| Sbjct 2013320 A---ATTGAGTTGCCAATTATATCAGAGAAGTGCTGATATATTCTTAGGTGTGCCATTTA 2013376 Query 137640 ACATTGCAAGCTACGCACTATTGACTCACCTTATCGC-AGAG-ATGACAGGACTAAAACC 137697 |||||||||| || |||| || ||| | || || | || ||| || || || Sbjct 2013377 ACATTGCAAGTTATAGTTTATTAACGCACTTAATAGCTAAAGAATG--TGGTTTAGAAGT 2013434 Query 137698 CGGAAAATTCATCCACACCTTCGGTGACGCTCACATTTACAGTAATCATCTTGAAGC 137754 |||| |||| | || || || ||||| ||||| |||||| |||||| | || || Sbjct 2013435 CGGAGAATTTGTGCATACTTTTGGTGATGCTCATATTTACTCAAATCATATCGATGC 2013491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479364398991680