Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq89 91.5 2e-13 >seq89 Length=3091062 Score = 91.5 bits (100), Expect = 2e-13 Identities = 199/293 (68%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 38125 AATATCGGGATACATTCGCTTAGAAGCGCATTCTAAAGCTAGTTGTTTGATATCATAATT 38184 |||||| |||||||||| |||| || ||| ||||| |||| |||||| ||||||||||| Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 38185 TGGGTCTTCACTATGAAGATTTAAACCTTCTTCAACGAACATAACCAATTTAGGAAAAAT 38244 || |||| | || ||| | |||| || || | | || | ||| || || || Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676 Query 38245 TGGAGTAATTCCATGACGACCTAATCCTCGAATACGATTTTTAAGAATAGCTTGTTGAAT 38304 | |||||| | || ||| || ||| || | | | |||||||| |||||||| || Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616 Query 38305 TAGTTTTTCT-TCCCAAGATGTCCCCATACCAAAT-GTAATGGTAACGAAAGGTGTTTGG 38362 | | || | | ||| || | |||||| |||| || || ||||||||||| Sbjct 556615 T-TTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAAT-GTTACAAAAGGTGTTTGA 556558 Query 38363 CCGTTAGAACTGAAAAGAGTATTAACTTCATATTCATATCCTTGAAAAGCATC 38415 || || || | | | || |||| ||||||||| | | || | |||||| Sbjct 556557 CCATTTGATGTATACAATGTGTTAATTTCATATTCTAAACTTTCTATAGCATC 556505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512570217049520