Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_020483.1 Length=42084 Score E Sequences producing significant alignments: (Bits) Value seq199 109 1e-19 >seq199 Length=31678 Score = 109 bits (120), Expect = 1e-19 Identities = 272/406 (67%), Gaps = 8/406 (2%) Strand=Plus/Minus Query 15472 TCTATTATTTGTGGTACGACATCACCATCAATAGAACCATACAGAGCTAACGCTTATGTA 15531 ||||||||| || | || || || |||||||||||| ||| |||| | | Sbjct 2848 TCTATTATTGCAGGCAATACTTCCCCTGGAATAGAACCATATGCAGCAAACGTATTCACA 2789 Query 15532 CAAAAAACAATGTCAGGTTCTTTTCTAGTTAAGAATAAATATTTAGAAAAGTTACTAG-A 15590 ||||| ||| | ||||||| ||| |||| || |||| ||| ||||| || | | | Sbjct 2788 CAAAAGACACTAACAGGTTCATTTGTAGTGCGAAACAAATTCTTACAAAAGCTATTGGCA 2729 Query 15591 GAAAAAAGGCATGAACACTGACGCAGTGTGGCAATCTATTGTAGCACAGAGAGGTTCTGT 15650 ||||||| || || || ||| | | ||| || ||| | || | |||||| || Sbjct 2728 GAAAAAAATCAAGA-CAATGATAAAATATGGTCCTCAATTTCAACAAATGAAGGTTCCGT 2670 Query 15651 ATTACATTTAGATGAACTATCTGATTATGAAAAAGATACATTTAAAACATC-TATAGAAA 15709 || |||||| || | |||||||| ||||| |||||| | ||| || Sbjct 2669 GCAGCACTTAGATTTCCTTAGCAAACATGAAAAATTGACATTCAAAACAGCGTAT-GAGC 2611 Query 15710 TTAATCAGCAATGGATAATAGAACATGCGGCAGACAGACAACAATTTATATGTCAAGGTC 15769 || |||| |||||| ||||||||||| || ||| || | || || ||| || Sbjct 2610 TTGATCAAAGATGGATTATAGAACATGCAAGCGATAGAACACCTTACATTTGCCAATCTC 2551 Query 15770 AGTCAGTAAATGTATTTGTACCTGCTGATGTAAACATTAAAG--AGTTACATGACATACA 15827 | |||||||| | ||| |||||||| | || |||| || | | || || | ||||| Sbjct 2550 AATCAGTAAACTTGTTTCTACCTGCTAACGT--ACATAAACGTCACTTGCACAAAATACA 2493 Query 15828 CATGTTAGCTTGGAAAAGAAAAATTAAAACTTTGTATTATTGTAGA 15873 |||| | |||||||||| | | |||| ||| ||||| |||||| Sbjct 2492 CATGCTTGCTTGGAAAAAAGGTCTGAAAAGTTTATATTACTGTAGA 2447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134544959957304