Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq570 91.5 2e-13 seq89 89.7 6e-13 >seq570 Length=38645 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 18009 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 18068 |||| ||||||||| ||| ||||||||||||||||| |||||| ||||||||||||| Sbjct 38309 GGGGGCTTAGCTCAGATGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC 38368 Query 18069 CCGCTATTCTCCA 18081 |||||| |||||| Sbjct 38369 CCGCTAGTCTCCA 38381 >seq89 Length=3091062 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 18127 ATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAA 18186 ||||| ||||||||||| || ||||| |||| ||||||| |||| |||||||||||| | Sbjct 2473699 ATTCCACAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAG 2473640 Query 18187 TCCTACCTGGGGAG 18200 ||||||||| |||| Sbjct 2473639 TCCTACCTGTGGAG 2473626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561238164128800