Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq89 89.7 6e-13 seq127 84.2 3e-11 >seq89 Length=3091062 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 |||| ||||||||| | |||||||||||| |||| ||||||| |||||||||| || ||| Sbjct 2473626 CTCCACAGGTAGGACTCGAACCTACGACCGATCGGTTAACAGCCGATAGCTCTACCACTG 2473685 Query 35571 AGCTACTGAGGA 35582 |||||||| ||| Sbjct 2473686 AGCTACTGTGGA 2473697 >seq127 Length=259506 Score = 84.2 bits (92), Expect = 3e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 71418 GGTAGGAATCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC-GCTGAGCTA 71476 ||||||| |||||||||||||| || ||||||||||| |||||||||||| ||||||||| Sbjct 251301 GGTAGGATTCGAACCTACGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAGCTGAGCTA 251360 Query 71477 C 71477 | Sbjct 251361 C 251361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572044374746640