Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq157 129 4e-25 >seq157 Length=245904 Score = 129 bits (142), Expect = 4e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 6177 AATTCATTTCCATGATATGGATGAGTCGCCGTTCTACCCGATGTTCAACTGC-TGTTTGG 6235 |||||| | ||| ||| |||| | || ||||||| ||||||||||||||| || || Sbjct 53821 AATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTCAACTGTATGCTTA- 53763 Query 6236 TCGATCTTAAAGGTATGTTGGCGAATGGGTTTATGATGGGTAACGCAGACATCGAAACCC 6295 |||| ||| |||| |||||| | || ||||| | ||||||||||||||| || || | | Sbjct 53762 TCGACCTTGAAGGCATGTTGACCAAAGGGTTCAAGATGGGTAACGCAGAGATTGAGCCGC 53703 Query 6296 CTAAGTCAATCTCAACTGCGTGTGCTATCACTGCACAAATTATCGCTCAGGTTGCGTGCC 6355 | || || |||||||| ||| || | || || ||||| ||||| ||||| || ||| Sbjct 53702 CAAAATCCATCTCAACCGCGACGGCAGTGACGGCCCAAATCATCGCGCAGGTGGCAAGCC 53643 Query 6356 ACCAATACGGTGGGGTTAGCCTCAATCGTCTTGATGAGGTGTTGGCACCATACGT 6410 || ||||| || | | | || ||| | ||||| | ||||||| | ||| Sbjct 53642 ACATCTACGGCGGCACCACCATTAACCGTATCGATGAAATTCTGGCACCGTTCGT 53588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342966939666638