Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq46 165 1e-35 >seq46 Length=4728336 Score = 165 bits (182), Expect = 1e-35 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||||||| | || |||| |||||| || | || || ||| ||| Sbjct 1481048 ATTTGCATACCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTA 1481107 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | ||| | ||| || | |||||||||||||||||| | ||||| || Sbjct 1481108 TAATCTGAGAGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGG 1481167 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||| ||||||||||| | ||| | |||| |||||| || || Sbjct 1481168 TCTGGGGGAATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGAT 1481227 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||||| |||||| || || || ||||| ||||| ||||| |||||||| Sbjct 1481228 GGCTCGACTTCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 152 bits (168), Expect = 9e-32 Identities = 176/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| ||||| | | | || || || | ||| | ||||| ||||| Sbjct 1480364 ATTTGCATACCTCCTCTGAGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTG 1480423 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || ||||| || | | ||| || | |||||| ||||||||||| |||||||| ||| Sbjct 1480424 TAATCTGATAATGTACGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGA 1480483 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||| ||||| ||||| | ||||| ||| ||| ||||| ||| Sbjct 1480484 TCTGGAGGGATACCTTCTTTGTCTTGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAA 1480543 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| | || || ||||| ||||||| ||||| ||||| ||||||||| Sbjct 1480544 GGTTCGACTTCCAAGGTGATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCATT 1480600 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| ||||| | ||| ||||| | |||| ||||| ||| || Sbjct 1481275 AATTTGCATCCCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTT 1481334 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| ||||| | |||| || || | ||| ||||| |||||||| || ||||| || Sbjct 1481335 ATAATCGGAAAGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTG 1481394 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || || ||||||||||| || || | ||| | |||| ||| ||||| || Sbjct 1481395 ATCTGGAGGAATACCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATTGTATCAGA 1481454 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||| ||||| | ||| || || || ||||| || || || || || || ||||| Sbjct 1481455 AGGCTCGACTTCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || |||||||||| | || || || | || | ||||| ||| |||||||| Sbjct 1481510 ATGCCTCCTCTCAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCA 1481569 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||| | ||| || | |||||||| || ||||| || ||||| ||||| || Sbjct 1481570 GAAAGGGTTCGACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGG 1481629 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||||||||| || || | || | |||| |||||| ||||||| ||| Sbjct 1481630 GGGATTCCTTCTTTATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCT 1481689 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || ||||| || || |||| || ||||| || || ||||| Sbjct 1481690 ACTTCAAGTGTAATAGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 132 bits (146), Expect = 9e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| | | | || || || | ||| | ||||| ||| || Sbjct 1463646 AATTTGCATTCCACCTCTGAGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTT 1463705 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||||| | |||| | ||| || | |||||| |||||||| || | || || || Sbjct 1463706 GTAGTCGGAAAGAGTTCGACCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTG 1463765 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||||||||| || || || | ||| | |||| ||| || || || Sbjct 1463766 ATCTGGAGGAATACCTTCTTTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGA 1463825 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| | ||| || |||||||| |||| ||||| ||||| ||||||||| Sbjct 1463826 TGGTTCTACTTCCAAAGTAATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCATT 1463883 Score = 129 bits (142), Expect = 1e-24 Identities = 170/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| ||||||| | | || || || | || | ||||| |||||| Sbjct 1480820 ATTTGCATACCTCCTCTCAGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTG 1480879 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || | ||| || || |||||||| || || ||||| ||||||||| Sbjct 1480880 TAGTCCGAAAGAGTGCGTCCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGA 1480939 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || ||||||||||| || || |||| || | |||| ||| || ||||| Sbjct 1480940 TCTGGTGGGATGCCTTCTTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGAT 1480999 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || || || ||||| || ||||| ||||| | || ||||| ||||||||||| Sbjct 1481000 GGTTCGACCTCAAGAGTGATGGTTTTGCCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 125 bits (138), Expect = 1e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 ||||| || || | |||| ||||| |||||| || ||||| | || | | ||| Sbjct 1479932 AGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAGAGTGTACGACCATCT 1479991 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | ||| || |||||||| || | || || ||||| || || ||||||||||||||| Sbjct 1479992 TCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGAATTCCTTCTTTATCT 1480051 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 || ||||||| ||||| ||| ||| ||||| || | ||| ||||| ||||| || ||| Sbjct 1480052 TGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTCGACTTCGAGAGTGATGGTT 1480111 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || | || || || || || ||||| Sbjct 1480112 TTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 114 bits (126), Expect = 2e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| ||||| |||||||| || ||||| ||||| ||||| || || |||||| Sbjct 1463500 TCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCTTTA 1463559 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | ||| | |||| ||| || || || | || ||||| | || || Sbjct 1463560 TCTTGAATCTTAGCTTTAACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAGGTGATT 1463619 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||||||| |||| ||||| ||||| ||||||||| Sbjct 1463620 GTTTTACCAGTTAAGGTTTTAACAAAAATTTGCATT 1463655 Score = 114 bits (126), Expect = 2e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||| || || |||||||| || | ||||| || || || || || |||||||| Sbjct 1480672 ATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCTTCTTT 1480731 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || ||||| | ||| | |||| ||| ||||| || | || ||||| ||||| || Sbjct 1480732 ATCCTGAATTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCGACTTCAAGAGTGAT 1480791 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||||| ||||| ||||| |||||||| Sbjct 1480792 CGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480827 Score = 113 bits (124), Expect = 8e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||| ||||| ||||||||||| ||||| || || ||||| || ||||| ||| Sbjct 1480217 TCTTCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTA 1480276 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | ||| | ||| ||| || || || | ||| ||||| || || || Sbjct 1480277 TCCTGAATCTTAGCTTTGACATTATCAATGGTGTCAGATGGCTCGACTTCGAGGGTGATT 1480336 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||||| ||||| ||||| |||||||| Sbjct 1480337 GTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 89.7 bits (98), Expect = 9e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | ||| | ||||| ||| ||||| || || | || | ||| || Sbjct 1463902 ACAAGATGAAGTGTTGATTCTTTCTGAATGTTATAATCCGAAAGAGTGCGTCCATCTTCC 1463961 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 || ||||||||||| || ||||| ||||||||||| || || || ||||||||||| || Sbjct 1463962 AACTGTTTTCCGGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCTTTATCCTGA 1464021 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || |||| || | |||| ||| || ||||| Sbjct 1464022 ATCTTGGCCTTAACATTTTCAATTGTGTCGGA 1464053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899638633556640