Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021332.1 Length=41392 Score E Sequences producing significant alignments: (Bits) Value seq89 250 7e-62 >seq89 Length=3091062 Score = 250 bits (276), Expect = 7e-62 Identities = 246/318 (77%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 6275 AATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAAC 6334 |||| |||| ||| || ||||| || || ||||| ||||||||||||||||||||||| Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 6335 GCCAAATGGTGTGAGTGTTACCACTTTCACTATCGCAGTTAACAGAACATTTACTAACGC 6394 || || ||||||||| | ||||| ||| | ||||| ||| | || ||||| || || Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 6395 TCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTTTTAGAAAACAAGCAGAAAA 6454 ||||| ||||| || ||||| || ||||| ||||| |||||||||||||||||| || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 6455 TGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACG 6514 ||||||||| || || | |||||| || || |||||||| || || | |||||||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 6515 CAGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGT 6574 || ||||||||| |||| || | ||||| ||||| || |||||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 6575 TCAATTCTTAGAACCGAA 6592 ||||||| | ||||| || Sbjct 140332 TCAATTCCTTGAACCTAA 140315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132330596824296