Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq157 152 6e-32 >seq157 Length=245904 Score = 152 bits (168), Expect = 6e-32 Identities = 789/1236 (64%), Gaps = 72/1236 (6%) Strand=Plus/Minus Query 152160 GCCCGTTCATACATTGAGTATCGCCACGATCGCGACATTGCCCGTGAACAGAAAAGCAAG 152219 || ||| | ||||||||||| || |||||||| || | ||||| ||||| | || | Sbjct 54063 GCGCGTACCTACATTGAGTACCGTCACGATCGTGATGTCGCCCGCGAACA---ACGCT-G 54008 Query 152220 CTGTTC---TCTGATATCTC-CGGCATGGTGAACCTGTCCAACAAAGAGATCACCAACGA 152275 | ||| || | | || ||| |||| | | | ||||| | | |||||| Sbjct 54007 CCGTTTGAATCAGGAAATTCGCGGTCTGGTTGAACAGAGCAACATGGCTCTGCTCAACGA 53948 Query 152276 GAACGCGAACAAAGATGCAAGGGTATTCCCGACACAGCGCGATTTGCTGGCGGGTATCGT 152335 |||||| |||||||| | || |||| || |||||||| ||||||| |||||||| Sbjct 53947 GAACGCCAACAAAGACAGTAAAGTGATCCCTACCCAGCGCGACCTGCTGGCCGGTATCGT 53888 Query 152336 AGCGAAGCATTTCGCCCGTAATCATATCCTCCCGAAACATATCGTAGAAGCGCATGATTC 152395 || ||||| | ||| | |||||||| ||| | | || || ||||| Sbjct 53887 TGCCAAGCACTATGCCAAGCAACATATCCTGCCGCGCGACGTGGTGATTGCCCATGAACG 53828 Query 152396 CGGTGACATCCACTATCACGATCTGGACTATAGCCCGTTCACCCCTTACACTAACTGCTG 152455 |||||| || ||||| |||||||||||||| ||||||| ||| ||||| Sbjct 53827 CGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTCAACTGTAT 53768 Query 152456 TCTGGTTGACCTGAAAGGTATGCTGGAGAACGGTTTTAAAATGGGTAACGCGGACATTGA 152515 || | ||||| |||| ||| || || || || || ||||||||||| || ||||| Sbjct 53767 GCTTATCGACCTTGAAGGCATGTTGACCAAAGGGTTCAAGATGGGTAACGCAGAGATTGA 53708 Query 152516 ACCGCCTAAATCGATCGGTGTTGCTACCGCTCTCATGGCGCAGATCACCGCACAGATTGC 152575 ||||| ||||| ||| || || || | | ||| || |||| ||| ||| | || Sbjct 53707 GCCGCCAAAATCCATCTCAACCGCGACGGCAGTGACGGCCCAAATCATCGCGCAGGTGGC 53648 Query 152576 CTCTCACCAGTACGGCGGGACAACCTTT--GCGAACGTGGATAAAGTGCTGGCTCCATAC 152633 ||| |||||||| || ||| || || | | ||| || | ||||| || | | Sbjct 53647 AAGCCACATCTACGGCGGCACCACCATTAACCGTA--TCGATGAAATTCTGGCACCGTTC 53590 Query 152634 GTCGAAATGACATTCTTCAAA--CATCTGCACGATGCTGAACATTACGGTATCGAACACT 152691 ||| | | | | | ||| || | | | ||||| | | || | | | | Sbjct 53589 GTC--ACCGCTAGCCATAAAAAGCACCGGGAAACCGCTGATGAGT--GGCA-CATTCCC- 53536 Query 152692 ATAATGATTATGTGTATGCGATTGAAAAGACT--GAAAAAGATGTG-TATGATGCGTTCC 152748 ||| | | |||||| | | || | ||| ||| || || || |||| Sbjct 53535 --GATGCGGACGCCTATGCGCT------GTCTCGTACCTAGA-GTGCTACGACGCCTTCC 53485 Query 152749 AGTCCTATGAGTATGAAGTAAACACCCTACATACTGCCAACGGACAAACCCCGTTTGTTA 152808 |||| || ||||||||||| || || || |||||||| || || || ||||| || | Sbjct 53484 AGTCGCTGGAATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGACGCCGTTCGTCA 53425 Query 152809 CCATCACTTTCGGTACTGGTACGAGCGATTATGAA---CGCATGATCCAGAAAGCGATCC 152865 || | ||||| || || || || ||| || |||||||| || | |||| Sbjct 53424 CCTTTGGTTTCGACCTCGGCACCAG---TTGGGAATCGCGTCTGATCCAGCAATCCATCC 53368 Query 152866 TGAAAAACCGTATTCGCGGCCTTGGTAAAGAGGGTATTACTCCGGTATTCCCGAAACTGG 152925 || ||||||||| ||| || || ||| | ||| ||| |||| ||||| ||||||| Sbjct 53367 TGCGCAACCGTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCCCAAACTGG 53308 Query 152926 TTATGTTC---ATGGAAAAAGGAATTAACCTTGATCCAGAGGATCAAAACTATGACATCA 152982 ||||| || | || | || | | | | |||| ||||||||||||| Sbjct 53307 ---TGTTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACATCA 53251 Query 152983 AACAACTTGCCCTGGAATGTGCTTCGAAACGCATGTACCCAGATATCATTAGCGCATCTA 153042 | ||||| || ||||| || | || || |||||||| |||||| | || || Sbjct 53250 AGCAACTGGCACTGGATTGCTCCAGCAAGCGGATGTACCCGGATATC-----CTCAATTA 53196 Query 153043 ATAACCGCCGTATCACTGGTTCTAGCGTTCCTGTA--TCTCCTATGGGTTGTCGCAGTTT 153100 | | | || |||| | | || | || | || ||||| || | ||| || Sbjct 53195 CGATCAG--GTTGTTAAGGTTACCG-GCTCGTTTAAGACGCCCATGGGCTGCCACAGCTT 53139 Query 153101 CCTTAGCGTGTGGCATGATGATAACGGTAATGAAATTCTGGATGGACGTAATAACCTTGG 153160 |||| |||||| |||| || | || || | || | ||||| || || ||||| || Sbjct 53138 CCTTGGCGTGT---ATGAGGAAGAGGGCAAGCAGATCCACGATGGTCGCAACAACCTCGG 53082 Query 153161 TGTGGTGACAATCAACCTCCCGCGCATTGCGATCGAAGCTGAAGCACAGGAAGATGAAGA 153220 || | | ||||||| |||||||| ||| | ||||| ||| |||| | ||||| Sbjct 53081 GGTAATCAGCCTCAACCTGCCGCGCATCGCGCTGGAAGCGGAA-CACA-----ACGAAGA 53028 Query 153221 CGCACACGACGCATTCTGGCGCATCCTTGATGAACGTCTGGATCTGTGCTTTGAAGCCCT 153280 || |||||| | | || ||| | |||||| | ||| |||| | Sbjct 53027 -GC--------GTTTCTGGAACCTGCTGGATAATCGTCTGCAACTGGCGAAAAAAGCGTT 52977 Query 153281 GATGACTCGTATCGAAAGCCTACGCGGTGTTAAAGCCAGTGTTGCGCCGATCCTGTACAC 153340 |||||| || |||| | | || |||||| |||| || ||||||||||| | Sbjct 52976 GATGACGCGCATCGCGCGTTTGGAAAACGTCAAAGCCCGTGTCGCTCCGATCCTGTATAT 52917 Query 153341 AGAAGGTGCTTTTGGTGTCCGACTGAAACCGGATGA 153376 |||||||| | ||||| || |||||| | || || Sbjct 52916 GGAAGGTGCCTGCGGTGTACGCCTGAAAGCAGACGA 52881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563788519433040