Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq157 141 1e-28 >seq157 Length=245904 Score = 141 bits (156), Expect = 1e-28 Identities = 1028/1631 (63%), Gaps = 70/1631 (4%) Strand=Plus/Minus Query 171958 AAAGAAAACGCGAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCAGGT 172017 || || ||||| || |||||| |||||||||||||| ||| ||| || | || ||| Sbjct 53952 AACGAGAACGCCAACAAAGACAGTAAAGTGATCCCTACCCAGCGCGACCTGCTGGCCGGT 53893 Query 172018 ACAGTTGCGAAACAATACGCACTCGAAGACTTTCTACCGAAGCACATTGCAGAAGCACAT 172077 | ||||| || || || || || | | || ||| || | | || ||| Sbjct 53892 ATCGTTGCCAAGCACTATGCCAAGCAACATATCCTGCCGCGCGACGTGGTGATTGCCCAT 53833 Query 172078 ATAAGTGGCGATATTCATTTTCATGATTTAGATTACAGTCCATTATTTCCGCAATTCAAC 172137 | | || || ||||| | || ||| | || ||| || || || ||| |||||| Sbjct 53832 GAACGCGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTCAAC 53773 Query 172138 TGTATGCTTATTGATATCAAAGGCATGCTTGAA-AACGGATTTAAAATGGGTAATGCTGA 172196 ||||||||||| || | |||||||| |||| || || || || |||||||| || || Sbjct 53772 TGTATGCTTATCGACCTTGAAGGCATG-TTGACCAAAGGGTTCAAGATGGGTAACGCAGA 53714 Query 172197 GATCGAAGAGCCAAACAGTATCGCGACTGCTGCGACTATTGTCA-CTCAGATCATACAAC 172255 ||| || |||||| ||| | || || || | | || | | || ||||| | Sbjct 53713 GATTGAGCCGCCAAAATCCATCTCAACCGCGACGGC-AGTGACGGCCCAAATCATCGCGC 53655 Query 172256 AAGTAAGTAGTCACATTTACGGCGGCAACACTGTTAATAGAATTGACGAAGTTCTAGCAC 172315 | || || ||||| |||||||||| ||| |||| | || || ||| |||| |||| Sbjct 53654 AGGTGGCAAGCCACATCTACGGCGGCACCACCATTAACCGTATCGATGAAATTCTGGCAC 53595 Query 172316 CATATGTTCGTAAGTCGTATT-ACAAATGGCTTGAGGTTGGTCGC-GAAGAG-----CAT 172368 | |||||| | || | ||| || || ||| || ||| ||| Sbjct 53594 C----GTTCGTCACCGCTAGCCATAAAAAGCACCGGGAAAC-CGCTGATGAGTGGCACAT 53540 Query 172369 -CCCGATTCAGACTCAAAAGCAGCTATCTTTGCACGTAAACGTGTCGAGAAAGAAACGTA 172427 |||||| | ||| | | || ||| ||| | || || | ||| || Sbjct 53539 TCCCGATGCGGACGCCTATGC-GCTGTCTC-GTACCTAGA-GTGC-------------TA 53496 Query 172428 CGACGCTTTTCAAACGTTTGAGTATCAAGTTAACACAATGCAGACTTCGAACGGTCAGAC 172487 |||||| || || || | || ||| |||| || || |||| ||| | || |||||||| Sbjct 53495 CGACGCCTTCCAGTCGCTGGAATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGAC 53436 Query 172488 GCCATTCACGACGATTAACTTCGGTCTAGGTACATCGTGGGAAGAAAAGCTTATTCAGAA 172547 ||| ||| || || |||| || || || |||||| || || ||| | Sbjct 53435 GCCGTTCGTCACCTTTGGTTTCGACCTCGGCACCAGTTGGGAATCGCGTCTGATCCAGCA 53376 Query 172548 ATGCATTCTGCAAAATCGAATTGCTGGTCTAGGCAAGACAAAGAAAACAGCGATTTTCCC 172607 || ||| |||| || || ||||| ||||| ||||| | ||||| ||| | ||||| Sbjct 53375 ATCCATCCTGCGCAACCGTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCC 53316 Query 172608 GAAACTTGTATTCACTATCAAAGATGGTGTGAACTTGAAAGAAGGCGATCCGTGTTACGG 172667 ||||| || ||| ||||| || ||||| || || | | ||||||| || | Sbjct 53315 CAAACTGGTGTTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGA 53256 Query 172668 CATTAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCTTGAGCTA 172727 ||| ||| | || ||||| || ||| | || ||||| ||||| || |||||| | | || Sbjct 53255 CATCAAGCAACTGGCACTGGATTGCTCCAGCAAGCGGATGTACCCGGATATCCTCAATTA 53196 Query 172728 TGAAAAGCTAGTAGAAACAACTGGCGGGTTTAAGTCACCGATGGGATGTCGTTCATTCTT 172787 || || | || | || ||| ||||||| | || ||||| || | ||| | Sbjct 53195 CGATCAGGTTGTTAAGGTTACCGGCTCGTTTAAGACGCCCATGGGCTGCCACAGCTTCCT 53136 Query 172788 AGGCGACTGGAAAAACGAAGATGGTGAAACTG-TATTCGACGGTCGAAACAATCTAGGCG 172846 |||| | | | ||||| || || | | | ||| ||||| ||||| || || | Sbjct 53135 TGGCG---TGTATGAGGAAGA-GGGCAAGCAGATCCACGATGGTCGCAACAACCTCGGGG 53080 Query 172847 TTGTCTCGTTGAACATTCCCCGAATTGCAATTGAAGCATCTGGTGATACTGCA---CGAT 172903 | || | ||| | || || || || | |||| | | | | | | || | Sbjct 53079 TAATCAGCCTCAACCTGCCGCGCATCGCGCTGGAAG---CGGAACACAACGAAGAGCGTT 53023 Query 172904 TCTTTGAAATTCTTCATGATCGT-TGCACACTCGCGTACGAAGCGTTGATGCTACGTATT 172962 ||| | | || || ||||| |||| ||| ||| | ||||||||||| || || Sbjct 53022 TCTGGAACCTGCTGGATAATCGTCTGCA-ACTGGCGAAAAAAGCGTTGATGACGCGCATC 52964 Query 172963 AAACGCTTTGATGATGTGACTGCATCAGTTGCACCGATTCTGTACTGTGAAGGTGCAATG 173022 || || || | || | || || || ||||| ||||| |||||||| Sbjct 52963 GCGCGTTTGGAAAACGTCAAAGCCCGTGTCGCTCCGATCCTGTATATGGAAGGTGCCTGC 52904 Query 173023 GGTGTACGTTTGAAACCAACTGATAAAGTCAGTGAAGTGTTCAAGCATGGTCGCTCAAGT 173082 |||||||| ||||| || || || ||| ||| | ||||| | ||||| || Sbjct 52903 GGTGTACGCCTGAAAGCAGACGACAACGTCGCTGAGATCTTCAAAAACGGTCGGGCATCG 52844 Query 173083 ATCTCACTTG-GTTACATCGGCTTACACGAG-GCAGTAACACTTCTGTCGCCTGATAA-- 173138 |||||| | | | || || || | || ||| || |||| | |||| || || Sbjct 52843 ATCTCATTGGAGCTATATTGGGGTTCATGAGACCATTAACGC-GCTGT---TTGGCAACC 52788 Query 173139 AGACATGCATACATTCGAGTCACAGCATAAGCAATTCCTTGCTGAGAAG------ATTGT 173192 ||||| || ||||| || || ||||| | | || || | || || Sbjct 52787 AGACA--CACGTGTTCGA--CA----ATGAGCAACTGCGTGAAAAGGCGGTCGCCATCGT 52736 Query 173193 AGAAACGCTTAGAGCGTATACTGACGCATGGAAAGAACTGACTGGTTACGGATTTAGTCT 173252 | | || | ||| || || ||||||||| || || ||||| || || || Sbjct 52735 CGCACGCCTGAAAGCCGCGACCGATCAGTGGAAAGAAGAAACCGGCTACGGTTTCAGCCT 52676 Query 173253 GTACAGCACACCAAGCGAATCGCTATGTGATCGTTTCTGTCGTCTTGATCAAGAGAAGTA 173312 ||||| || || || ||| || ||||| |||||||| ||| | || | | | Sbjct 52675 TTACAGTACGCCGAGTGAAAACCTGTGTGACCGTTTCTGCCGTATCGACACCGCTGAATT 52616 Query 173313 CGGTATCATTACTGGTATCAATGACAAAGACTACTATACAAACTCGTTCCACTTAGACGT 173372 ||| | | | || | | || |||| ||||| || ||| || ||| | ||||| Sbjct 52615 CGGCGTGGTACCAGGCGTGACCGATAAAGGTTACTACACCAACAGCTTTCACCTGGACGT 52556 Query 173373 ATTCAAGAAAGTGAATCCGTTCGAGAAGATTGACTTTGAAGCATCGTACCCAGCATATGC 173432 ||||| |||||||| | | |||| || ||||||||| | |||||| | || Sbjct 52555 GGAGAAGAAGGTGAATCCTTACCAGAAAATCGACTTTGAACTGCCCTACCCACCGCTGGC 52496 Query 173433 AAACGGCGGTTTCATTTGCTATGCAGAGTTCCCGAACATGCGCGACAATATCAAAGGTCT 173492 |||||| || ||||||||||| | |||| |||||| ||| | || |||||| || Sbjct 52495 AAACGGAGGCTTCATTTGCTACGGCGAGTATCCGAACCTGCAACATAACCTCAAAGCGCT 52436 Query 173493 AGAACGTGTATGGGATTA-TGCTCATAGCAAAGTTGCTTACTTCGGTACAAACACACCGA 173551 ||| || |||||||| ||| ||||| || | || | ||| || || || |||| Sbjct 52435 GGAAGACGTCTGGGATTACAGCT-ATAGCCGTGTGCCCTATTACGGCACCAATACGCCGA 52377 Query 173552 TTGATCAATGT 173562 | ||| | ||| Sbjct 52376 TCGATGAGTGT 52366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791893321826320