Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq89 107 1e-18 >seq89 Length=3091062 Score = 107 bits (118), Expect = 1e-18 Identities = 185/266 (70%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 96133 TTAAAGCCTTCTTCTAGAATTTTCTGAGCTAATACTGTAGCTGTGGTTGTTCCATCTCCT 96192 || || ||||||| || || || ||||| || || || || |||||||| || || Sbjct 1357612 TTCAATCCTTCTTGTATCATAGCTTGTGCTAAAACAGTCGCAGTTGTTGTTCCGTCACCA 1357553 Query 96193 ACTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTAAGTTTTCAAAT 96252 | | ||| || || | |||||||| || || | || ||||| | ||||||| | Sbjct 1357552 GCAATTTCATTTGTTTTGTTAGCTACTTCTTGAACTAATTTTGCACCCATGTTTTCATAA 1357493 Query 96253 GGATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAATGATTG--GAT 96310 ||||||||||| | ||||||| |||| | | |||||||| || || || | | ||| Sbjct 1357492 GGATCTTCTAACTCAATTTCTTTAGCAATTGTCACACCATCATTTGTGATAAGCGGTGAT 1357433 Query 96311 -TATACTGGTCTAAACCTAGTATAACATTCTTACCTGATGGTCCTAGAGTTACTTTAACT 96369 |||| ||| | | | || ||||| ||| |||||| | || |||||||| Sbjct 1357432 GTATA---TTCTTTATCCAATACTACATTACGCCCTTTTGGTCCAATTGTAACTTTAACG 1357376 Query 96370 GCATTAGCTAAAGCATCTACACCTCT 96395 ||||||||||| |||||||||||| Sbjct 1357375 GCATTAGCTAATTTATCTACACCTCT 1357350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321207311477038