Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq81 102 1e-15 seq13 96.9 4e-14 >seq81 Length=2317497 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || || | |||||||||||| ||||| || | | Sbjct 2278071 GCTTGGCCAGCTCACCGGGCAGGAGGAGCCTCACGGCGGTCTGTATCTCACGGCTTGATA 2278012 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||||| || | | || || ||||||| |||| || |||| | Sbjct 2278011 TTGTCATACGCTTGTTGTAGAGGGAAAGGCGTGACGCCTCGGCCGCGATCCGTTCGAATA 2277952 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||| | ||||| |||| |||| ||| ||| |||| Sbjct 2277951 TGTCGTTCACCAAGCTGTTCATTATGCTCATCGCCTTGGACGAGACGCCTGTGTCCGGGT 2277892 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||||| ||| Sbjct 2277891 GGACCTGCTTGAGCACCTTGTATATG 2277866 >seq13 Length=9188118 Score = 96.9 bits (106), Expect = 4e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 869195 ATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATG 869254 |||| ||||||||| || | || || || | ||||| || || || | ||| || || Sbjct 3474396 ATCAATTCGTTGCTGAAAGTCAGCCCAGGTAGAAGGCCACGTTTTTTCATCCAGAATATC 3474455 Query 869255 GCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCG 869314 ||| ||||||||| ||||||||||| ||||||||||||||||| | | || |||||| Sbjct 3474456 GCGGCGAAACTGCCGGAGAAAAAGATTCCCTCGACGGCGGCAAAAGCCACGACTCGCTCG 3474515 Query 869315 GCAAAGGT 869322 | ||||| Sbjct 3474516 CCGAAGGT 3474523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107024145314434