Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq46 165 7e-36 seq105 104 2e-17 seq69 84.2 2e-11 >seq46 Length=4728336 Score = 165 bits (182), Expect = 7e-36 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || ||||||| || |||||||| || |||||||| | | Sbjct 1481740 GATGCAGATCTTCGTAAAGACTTTAACCGGCAAGACTATTACACTTGAAGTAGAGCCTTC 1481681 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || || |||||||||||| ||||||||||| || || ||||| Sbjct 1481680 CGACACTATTGAAAATGTCAAGGCAAAGATCCAAGATAAAGAAGGAATCCCCCCAGATCA 1481621 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||| || || || |||||||| || ||| ||| | | || || ||||| Sbjct 1481620 GCAGAGGTTGATTTTCGCTGGAAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTATAA 1481561 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||||||| ||||| || || ||| | |||||| ||||| | |||||| Sbjct 1481560 CATTCAAAAAGAATCAACCCTCCACCTTGTGTTGAGATTGAGAGGAGGC 1481512 Score = 150 bits (166), Expect = 2e-31 Identities = 173/232 (75%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| |||| |||||||| ||||| | ||||||||| | | Sbjct 1463882 ATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACAATTACTTTGGAAGTAGAACCATCT 1463823 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| |||||||| || |||||||| || ||||| ||||| Sbjct 1463822 GACACAATTGAAAATGTGAAAGCTAAGATCCAGGATAAAGAAGGTATTCCTCCAGATCAG 1463763 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | ||||||||||| ||||| || || ||| ||| | || || || ||| Sbjct 1463762 CAAAGGCTTATCTTTGCCGGTAAACAACTTGAAGATGGTCGAACTCTTTCCGACTACAAC 1463703 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAA 24935 ||||| || ||||||||||| ||| | || ||| | || | |||| |||| Sbjct 1463702 ATTCAGAAAGAATCGACACTTCACCTTGTCTTGAG---GCTCAGAGGTGGAA 1463654 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| ||||||| |||||||| || || || || | ||||| || |||| Sbjct 1481284 GATGCAAATTTTTGTTAAAACTCTAACCGGAAAGACCATAACTTTAGAAGTCGA-GCCAT 1481226 Query 24763 C-GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | ||||| | |||| || ||| || || |||||||||||||| || || || || | Sbjct 1481225 CAGACACTATTGAAAATGTCAAAGCTAAAATACAAGACAAAGAAGGCATTCCCCCAGACC 1481166 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | |||| |||||||| ||||| || |||||| | | | | |||||||||| Sbjct 1481165 AGCAGAGGCTGATTTTTGCCGGAAAACAACTCGAGGATGGGCGTACGCTCTCAGATTATA 1481106 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||||||||| | || ||||| | | ||| | ||||| Sbjct 1481105 ACATTCAAAAGGAATCGACTTTGCATTTGGTTCTCAGGTTGAGAGGAGG 1481057 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | ||||| | ||||| ||||| || || | ||||| || | Sbjct 1481970 ACAATGCAGATCTTTGTGAAAACTTTGACCGGAAAAACCATCACATTGGAAGTTGAGCCT 1481911 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || ||| | || | || || || ||||| ||||||||||| || || || || Sbjct 1481910 TCAGATACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGTATCCCGCCAGAC 1481851 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 |||||| | |||| || || || || || || |||||| |||| | || |||||| Sbjct 1481850 CAACAAAGGCTGATTTTCGCTGGCAAGCAACTTGAGGATGGTAGAACTCTCTCGGATTAT 1481791 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||||||||||||||| || |||||||| Sbjct 1481790 AACATTCAAAAGGAATCGACTCTGCACTTGGT 1481759 Score = 127 bits (140), Expect = 2e-24 Identities = 159/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| |||| || ||||| || || | ||||| ||| | | Sbjct 1480599 ATGCAAATCTTTGTGAAAACATTAACAGGGAAAACAATCACCTTGGAAGTCGAACCTTCT 1480540 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| |||||| || || |||||||||||||| || ||||| ||||| Sbjct 1480539 GATACAATTGAAAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCAG 1480480 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880 || | ||||| |||||||| ||||| || || ||| ||| ||| | |||||||| Sbjct 1480479 CAGAGATTGATTTTTGCCGGCAAACAACTTGAAGATGGTCG---TACATTATCAGATTAC 1480423 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 || || ||||| ||||| ||||| ||| | || || Sbjct 1480422 AATATCCAAAAAGAATCCACACTCCACCTTGTTTT 1480388 Score = 120 bits (132), Expect = 3e-22 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || ||||| || || |||||||| || |||| | Sbjct 1480143 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAAACCATCACTCTCGAAGTCGA-GCCATC 1480085 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| |||||| || |||||||| ||||||||||| || || ||||| Sbjct 1480084 AGATACCATTGAAAACGTAAAAGCCAAAATCCAAGATAAAGAAGGAATTCCCCCAGATCA 1480025 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880 ||| | | ||||||||||| || || ||||| ||| ||| | || | || ||||| Sbjct 1480024 GCAAAGGCTCATCTTTGCCGGCAAGCAACTGGAAGATGGTCG-TACAC-TCTCCGATTAC 1479967 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || ||||| || ||||| || || ||| | || || || | || |||||| Sbjct 1479966 AATATTCAGAAAGAATCTACTCTCCACCTCGTACTGAGACTCCGAGGAGGC 1479916 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | ||||| ||| | || Sbjct 1570257 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACCATCACCTTGGAAGTTGAACCATCC 1570316 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| |||||||| || || || || Sbjct 1570317 GATACCATTGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 1570376 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || || ||||| |||||| | | | || || || ||| Sbjct 1570377 CAGAGATTGATCTTTGCAGGAAAGCAGCTCGAGGATGGACGTACTCTTTCTGACTACAAC 1570436 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || ||||| ||||| || || ||||||||| Sbjct 1570437 ATCCAAAAAGAATCAACCCTCCACTTGGTG 1570466 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | ||||| || | | Sbjct 1481511 ATGCAGATCTTCGTGAAGACTCTTACAGGAAAGACCATCACTTTGGAAGTCGAGCCTTCT 1481452 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| ||||| ||||| ||||| || || ||||| ||||| Sbjct 1481451 GATACAATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAG 1481392 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| || || || || || || ||| | || ||||||||| Sbjct 1481391 CAGAGGTTGATTTTTGCAGGAAAGCAACTTGAAGACGGCCGAACACTTTCCGATTATAAC 1481332 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || || | || ||| ||||||| ||||| Sbjct 1481331 ATTCAGAAAGAATCTACCCTCCATCTTGTATTGAGATTGCGAGGAGG 1481285 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 ||||||||||| | || || || || || || || || || | ||||| | ||||| | Sbjct 1570029 ATGCAGATCTTCGTGAAGACTCTTACTGGAAAGACAATCACTTTGGAAGTTG-AGCCATC 1570087 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || ||||||||||| |||||||| || || || || Sbjct 1570088 GGACACCATTGACAATGTCAAAGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGACCA 1570147 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||| ||||| || ||||| |||||| | | | || || || || Sbjct 1570148 GCAGAGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACGCTTTCTGACTACAA 1570207 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||| ||||| || || ||| | || ||| | ||| | ||||| Sbjct 1570208 CATCCAAAAAGAATCCACCCTCCACCTTGTTTTGAGGTTGAGAGGAGG 1570255 Score = 98.7 bits (108), Expect = 9e-16 Identities = 136/190 (72%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 24746 CTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAA 24805 || || || ||| | |||||||| | |||| || || ||||| || || |||||| Sbjct 1464068 CTTGAGGTCGAACCATCCGACACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAA 1464009 Query 24806 GGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGA 24865 || || || || |||||||| | || ||||| ||||| |||||| |||| ||| | Sbjct 1464008 GGCATCCCACCAGATCAACAGAGGTTAATCTTCGCCGGAAAACAGTTGGAAGATGGACGC 1463949 Query 24866 AACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGC 24925 | | || |||||||||||||| || ||||| ||||| || | || ||| | || | Sbjct 1463948 ACTCTTTCGGATTATAACATTCAGAAAGAATCAACACTTCATCTTGTCTTGAG---GCTC 1463892 Query 24926 GGAGGCGGAA 24935 ||||||||| Sbjct 1463891 AGAGGCGGAA 1463882 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| |||| || || || || || || ||||| ||| | | Sbjct 1480827 ATGCAAATCTTTGTGAAAACTTTAACAGGAAAGACGATCACTCTTGAAGTCGAACCATCG 1480768 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| || || || || |||||||| || || || || || Sbjct 1480767 GATACGATTGAAAATGTCAAAGCGAAAATTCAGGATAAAGAAGGTATCCCACCAGACCAG 1480708 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||||||||| || ||| | || ||| | | | | || ||||||||| Sbjct 1480707 CAGAGGCTCATCTTTGCCGGTAAGCAGTTAGAAGATGGGCGCACTCTTTCTGATTATAAC 1480648 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || || ||||| || || || |||| Sbjct 1480647 ATCCAGAAAGAATCCACTCTTCATCTTG 1480620 >seq105 Length=1502237 Score = 104 bits (114), Expect = 2e-17 Identities = 273/415 (66%), Gaps = 4/415 (1%) Strand=Plus/Minus Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 ||||| || ||||| | ||| | ||| ||||| || || || || ||||| ||||| ||| Sbjct 285623 TATTCTACTATTTCTGTACAAAGATTGCTACATTTAATGGTGCCCAAATTCTGTTGGTTG 285564 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242 ||||| ||| || ||||||||||| ||||| || || || |||||||| || | | Sbjct 285563 GATTTTCTGTTGCACGCATCTTTGTACAGCATGTAAGGAACACCGGTTTCCACCTGAGAC 285504 Query 139243 TCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGC 139302 || || || || |||||| || || | ||||| || | ||| | | ||| Sbjct 285503 TCAATTATAGCATTCCACAAGTTTCTTGCGTCAATTTGTCGTATATAACGACCTTCGTTT 285444 Query 139303 TCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACAC 139362 || || ||| | || || || || || || ||| || ||||| |||| | |||| Sbjct 285443 TCATATTTTACATACAGATCCTCAAAGTTTTTACCCCAGACGTCATGAAGACCAGGACAT 285384 Query 139363 TTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCC 139422 || | || ||||| || |||| || | | || | |||||||| ||| Sbjct 285383 TTATGCGGGCACATAAGACTCCATTTCTTATTAGATTCAACCCTTTCCATGAACAAATCA 285324 Query 139423 GGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTA--TCTTCCGAACCCATGTTAC 139480 |||||||| | || | | | ||| || ||| | || |||||| || | || Sbjct 285323 GGAATCCAAAGTGCATAAAAAAGATCACGGGCC--CGTACCTCTTCCTTTCCAGTATTTT 285266 Query 139481 GTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGC 139535 ||||| | || || ||||||| ||||| ||||| || || || || || || Sbjct 285265 TTTTCAAATCGAGAAACTCAAAAATATCAGCATGCCAAGGCTCGAGGTAAATTGC 285211 >seq69 Length=2547145 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || ||||| || || || || || || || || || | Sbjct 1551694 GATGCAGATTTTTGTGAAGACCCTAACGGGCAAGACAATCACCCTTGAGGTCGAGCAGTC 1551635 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || ||| ||||||||||| || || || || || || || || Sbjct 1551634 TGACACAATTGAAAATGTCAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCGGACCA 1551575 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 ||| | ||||| || |||||||| ||||| || || Sbjct 1551574 ACAGAGGTTGATTTTCGCCGGGAAGCAGCTCGAAGA 1551539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449889715544560