Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq353 96.9 6e-15 seq89 95.1 2e-14 seq570 86.0 1e-11 >seq353 Length=18191 Score = 96.9 bits (106), Expect = 6e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 35580 GTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACG 35639 |||||||| ||| || || || |||||||||||||| |||| |||| || || ||| Sbjct 9247 GTAGTGTTTGAGAATTCGAGTGTGACATGACCTTCCCATCCAGGCTCCAAAGGAGTAACG 9306 Query 35640 TTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTG 35699 || || || || ||||| | || || || ||||| | ||| | || || || || Sbjct 9307 TTTACTATAATCCCACACCTTGCATAAGTCGATTTACCAACACAAATAACTAGTACATTC 9366 Query 35700 CGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAAT 35755 | || || || || ||||| || || | ||| || ||||||||||| |||||||| Sbjct 9367 CTTGGTATACGAAAATATTCAACTGTACTTGCAAGTGCGAAGCTGTTTGGCGGAAT 9422 >seq89 Length=3091062 Score = 95.1 bits (104), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 122657 GGTTCGAGTCCAACACGACCCACCAGTTTCATAGGCCCCATAGTCGAGCGGTTAAGACGC 122716 ||||||||||| | || ||||| ||| |||| | | |||| ||||||||| |||| Sbjct 345512 GGTTCGAGTCCCGTAGGAGTCACCATTTTTTTAGGTCTCGTAGTGTAGCGGTTAACACGC 345571 Query 122717 TTGCCTGTCACGCAAGAAATCGCGGGTTCGATTCCCG 122753 ||||||||||||| || ||||||||||||||||||| Sbjct 345572 CTGCCTGTCACGCAGGAGATCGCGGGTTCGATTCCCG 345608 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 1468341 GCCGGCCTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGT 1468400 Query 120288 CCTGATGCCGGCACCATATT 120307 ||| ||||||||||| || Sbjct 1468401 CCTCTGGCCGGCACCATTTT 1468420 >seq570 Length=38645 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 37780 GCCGGCCTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGT 37839 Query 120288 CCTGATGCCGGCACCAT 120304 ||| ||||||||||| Sbjct 37840 CCTCTGGCCGGCACCAT 37856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825902325808080