Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_022771.1 Length=156648 Score E Sequences producing significant alignments: (Bits) Value seq89 84.2 2e-11 >seq89 Length=3091062 Score = 84.2 bits (92), Expect = 2e-11 Identities = 169/246 (69%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 16907 TTAGCAATGATGTGGGTTAGTAGTGCATAACTTGCTATGTTAAAAGGGGCACCTAAGAAA 16966 ||||| || | ||| |||| || ||||||||| |||||||| || |||||||||| Sbjct 2013416 TTAGCTATTAAGTGCGTTAATAAACTATAACTTGCAATGTTAAATGGCACACCTAAGAAT 2013357 Query 16967 ATATCATTTGATCTCATATATAACTTACAGCTCAAGGTACCGT--TGACTACGTAGAACT 17024 |||||| |||| |||||| | || ||||| | || | ||| || || || | Sbjct 2013356 ATATCAGCACTTCTCTGATATAATTGGCAACTCAATTTTCCATCTTGA--ACATAAAATT 2013299 Query 17025 GGAATAGGACATGACAAGGTGGTAGAGCCAT-GTACTCTAAGTCTCCTACGTTCCACGCA 17083 |||| | ||| || ||||||| |||||| ||| || | || | ||||||||| Sbjct 2013298 GGAACATCGTATGGCATGGTGGTAAAGCCATTGTA-TCAATTTCAGTTGGATTCCACGCA 2013240 Query 17084 GATACAATGTGTCGGCGGCTGTCTGGGTTAGTTTTAATCTGTTTAATCACGTCCTGTAGC 17143 || | || |||| || | |||||| ||||||| || ||||| || | || | Sbjct 2013239 GAAATGATATGTCTACGAGAATTAGGGTTATTTTTAATTTGATTAATTACTGTTTTTAAC 2013180 Query 17144 TGATCG 17149 |||||| Sbjct 2013179 TGATCG 2013174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501136817423360