Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_022914.1 Length=43394 Score E Sequences producing significant alignments: (Bits) Value seq89 971 0.0 >seq89 Length=3091062 Score = 971 bits (1076), Expect = 0.0 Identities = 606/651 (93%), Gaps = 0/651 (0%) Strand=Plus/Minus Query 25048 TACGAACAAGTGTTCTATTATGTTCATGAGGTGATTATATGATTCCAAATTTAGATTGGA 25107 ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 2724782 TACGAACGAGTGTTCTATTATATTCATGAGGTGATAATATGATTCCAAATTTAGATTGGA 2724723 Query 25108 ATAAAAACTTTCAAGAATTTCAAGAAATATTAAATTCTGGTATTAATCCAGAGTGGTTGT 25167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2724722 ATAAAAACTTTCAAGAATTTCAAGAAATATTAAATTCTGGTATTAATCCAGAGTGGTTGT 2724663 Query 25168 ACAATGCCAAAGCGAATATGATTTTAAATCCTGCATACACAGGAGAAGGTAAACAATTTT 25227 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2724662 ATAATGCCAAAGCGAATATGATTTTAAATCCTGCATACACAGGAGAAGGTAAACAATTTT 2724603 Query 25228 TCTTCACAAAAGATATTATAAAAGCTAGTAAAACGATTCCGtttttttGAGGTGATTATA 25287 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 2724602 TCTTCACAAAAGATATTATAAAAGCTAGTAAAACGATTCCATTTTTTTGAGGTGATAATA 2724543 Query 25288 TGAAACCAATCAATCCAGATGTACCAGATGAATACAAATACGAAACTGATTACCGTAATA 25347 ||||| | | |||||| | |||||||||||||| ||||||||||||||||||||||| | Sbjct 2724542 TGAAAGTAGTAAATCCATACGTACCAGATGAATATAAATACGAAACTGATTACCGTAAAA 2724483 Query 25348 TACCTAGAGAGTATCTTAATCCACGTATACCAGAAGGTAGAGGCATCGTTAAGTGGCAAG 25407 ||||||||||||||||||||||||||||||| ||||| | || || ||||||||||| | Sbjct 2724482 TACCTAGAGAGTATCTTAATCCACGTATACCCGAAGGACGTGGAATTGTTAAGTGGCAGG 2724423 Query 25408 CCTTTAAGACGCTGCCTGAGCAATACGAGCAACTAGAACAATACATACAAGACCAAAATA 25467 | ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 2724422 CGTTTAAGACGATGCCTGAATAATATGAGCAACTAGAACAATACATACAAGACCAAAATA 2724363 Query 25468 AAATTGAAAAACCGATATTAGACGACGATCAGTTGAATGAATTAAATAACACATTAATTT 25527 | || || ||||| ||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct 2724362 AGATAGATAAACCAATATTAGACGACGATCAATTGAATGAACATAATAACACATTGATTT 2724303 Query 25528 TCAAAATGTACAACGACCCATCTATTGAATTGCGTTACTTCGAAAATGGATATATTAAAA 25587 |||||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||| Sbjct 2724302 TCAAAATGTATAACGACCCAGCTATTGAATTACGTTACTTCGAGAATGGATATATTAAAA 2724243 Query 25588 CGAAAGTAGGTTACATTCATAAAGTAGATGTGTATACTAAAACACTGCACATGTATGAAG 25647 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 2724242 CGAAAGTAGGTTACATTCATAAAGTAGATGTGCATACTAAAACACTACACATGTATGAAG 2724183 Query 25648 ATACTGGAATTAGTATATTGAATTTAAAAGACATATTGGAGATAAAATAAA 25698 |||||||||| | | | |||||||||||||||||||||||||||||||||| Sbjct 2724182 ATACTGGAATGAATGTGTTGAATTTAAAAGACATATTGGAGATAAAATAAA 2724132 Score = 264 bits (292), Expect = 3e-66 Identities = 250/319 (78%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 33164 AATGATAAATAGAGTCGTATTAGTAGGTAGATTAACAAAAGACCCGGAATTTAGAACAAC 33223 ||||||||||||||| || ||||| ||| | ||||| ||||| || |||| ||||||||| Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 33224 ACCATCTGGAGTGAGTATTGCAAATTTCACTTTAGCTGTTAATAGAACATTCACAAATGC 33283 ||| || || |||||| |||| | ||| ||| |||| || || | || || |||||||| Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 33284 ACAAGGCGAGCGTGAAGCAGACTTCATCAATGTAGTTGTTTTTCGTAAACAAGCAGAAAA 33343 ||||| || || |||||||| ||||| ||| || |||||| | ||||||||||| || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 33344 TGTAAACAACTATTTATTCAAAGGTCATTTAGCTGGTGTTGATGGTCGTATACAATCACG 33403 |||||| ||||| || ||||||||| |||||| || ||||| ||||| || |||||||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 33404 TAGTTACGAAAACAATGAAGGCAAACGAATATTCGTTACCGAAGTAGTAGCGGACAGTGT 33463 ||| || |||||| | ||||| || | || || || |||||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 33464 TCAATTCATGGAACCTAAA 33482 ||||||| | ||||||||| Sbjct 140332 TCAATTCCTTGAACCTAAA 140314 Score = 242 bits (268), Expect = 1e-59 Identities = 235/302 (78%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 25051 GAACAAGTGTTCTATTATGTTCATGAGGTGATTATATGATTCCAAATTTAGATTGGAATA 25110 |||||| |||||| |||| | | ||||||||||| ||| || ||||||||||||| || Sbjct 1530039 GAACAAATGTTCTGTTATATACTTGAGGTGATTACATGGAACCCAATTTAGATTGGAGTA 1530098 Query 25111 AAAACTTTCAAGAATTTCAAGAAATATTAAATTCTGGTATTAATCCAGAGTGGTTGTACA 25170 ||| ||||||||||||||||| ||||||||||| || || |||||||| ||| | || Sbjct 1530099 AAACTTTTCAAGAATTTCAAGATATATTAAATTCAGGAATCAATCCAGAATGGCTTTATT 1530158 Query 25171 ATGCCAAAGCGAATATGATTTTAAATCCTGCATACACAGGAGAAGGTAAACAATTTTTCT 25230 | | ||||| || |||||||| ||||| ||||| || || || |||||||||||||||| Sbjct 1530159 CTACAAAAGCAAACATGATTTTGAATCCAGCATATACTGGGGAGGGTAAACAATTTTTCT 1530218 Query 25231 TCACAAAAGATATTATAAAAGCTAGTAAAACGATTCCGtttttttGAGGTGATTATATGA 25290 ||||||| |||||| | ||||||||||||| ||| | || |||| || | | ||||| Sbjct 1530219 TCACAAAGGATATTGTTAAAGCTAGTAAAATTATTTCATTCTTTTAAGTTAGTACTATGA 1530278 Query 25291 AACCAATCAATCCAGATGTACCAGATGAATACAAATACGAAACTGATTACCGTAATATAC 25350 | || || |||| | |||| |||||| ||| |||||| | | | || ||| ||| Sbjct 1530279 AGATAACAAACTCAGACGCACCACGTGAATATAAACACGAAATTTACTTCCATAAGATAT 1530338 Query 25351 CT 25352 || Sbjct 1530339 CT 1530340 Score = 136 bits (150), Expect = 1e-27 Identities = 100/114 (88%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 23982 AGGCACTTATGTGCTTGCCCTAttttttt--ATGGTATAATTTATTTACATGTATAAGCC 24039 |||| |||| ||||||||||||||||||| ||| |||||| |||||||||||||||| | Sbjct 2725911 AGGCGCTTAGGTGCTTGCCCTATTTTTTTTTATGTTATAATATATTTACATGTATAAGTC 2725852 Query 24040 CTTTCCCGAATAGTTTTATATCCGCCGCCCACACATGTCACTGGGTGGTTATTT 24093 ||||| | ||| |||||||||| || ||| ||||||||||||||||||||||| Sbjct 2725851 CTTTCTCAAAT-TTTTTATATCCACCACCCTCACATGTCACTGGGTGGTTATTT 2725799 Score = 82.4 bits (90), Expect = 2e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 25327 ACGAAACTGATTACCGTAATATACCTAGAGAGTATCTTAATCCACGTATACCAGAAGGTA 25386 ||||||||||||| | ||||| |||||||| ||| | |||||| |||||| ||||| Sbjct 1392175 ACGAAACTGATTATAGAAATATCCCTAGAGAATATTTAAATCCAAATATACCCAAAGGTC 1392116 Query 25387 GAGGCATCGTTAAGTGGCAAGCCTT 25411 | ||||| ||||| |||||| |||| Sbjct 1392115 GTGGCATGGTTAAATGGCAACCCTT 1392091 Score = 80.6 bits (88), Expect = 7e-11 Identities = 127/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 25299 AATCCAGATGTACCAGATGAATACAAATACGAAACTGATTACCGTAATATACCTAGAGAG 25358 ||||| ||| ||||||||||| ||||| ||||||||||| | || ||||| ||| | Sbjct 1386534 AATCCTAATGCGCCAGATGAATATAAATATGAAACTGATTATAGAAAAATACCAAGAAAA 1386593 Query 25359 TATCTTAATCCACGTATACCAGAAGGTAGAGGCATCGTTAAGTGGCAAGCCTTTAAGACG 25418 ||| | || || || || |||| | || | | || |||||||| ||| ||| Sbjct 1386594 TATTTAAACCCTAAAATCCCTCAAGGGCGTGGAAAAATCAAATGGCAAGCTTTTGCGACT 1386653 Query 25419 CTGCCTGAGCAATACGAGCAACTAGAACAATACATACAAGACCAAAATAAAATTGAAAAA 25478 || || | || | || |||||||| ||| | || ||||||||||| |||||| Sbjct 1386654 CTCCCGCAACAGTTTGAAATTTTAGAACAAATTATAAAGGATCAAAATAAAATAGAAAAA 1386713 Query 25479 CC 25480 || Sbjct 1386714 CC 1386715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138736890165744