Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_023007.1 Length=168876 Score E Sequences producing significant alignments: (Bits) Value seq89 104 3e-17 >seq89 Length=3091062 Score = 104 bits (114), Expect = 3e-17 Identities = 552/873 (63%), Gaps = 46/873 (5%) Strand=Plus/Minus Query 67911 ATCAGTTGGGTCAACGTAGTGGAAGCGGTGTAGCATACTTGAATATTTTCCATGATGATA 67970 |||| | || |||||| ||| |||| || ||| || ||||||||||| ||||| Sbjct 2803288 ATCAACTTGGACAACGTCCTGGTGCGGGTGCAGTATATTTAAATATTTTCCACTATGATG 2803229 Query 67971 TTCTTGAGTTTTTAGACACAAAACAAATCAACGTGGATGAGAAGAAGCGTTTGAAAACAT 68030 || ||||||||||| || ||| || | |||| ||||| | |||||| ||| Sbjct 2803228 TTGAAGAGTTTTTAGATACGAAAAAAGTAAACGCTGATGAAGATTTACGTTTGTCTACAA 2803169 Query 68031 TATCAATCGGTGTAATTGCCCCAGATAAATTCTTTGAACTTGCTGAAAAGAATG---AG- 68086 | |||| || |||||| ||| ||| |||||||| ||||| ||||||| | || Sbjct 2803168 TTTCAACAGGATTAATTGTGCCATCTAAGTTCTTTGATCTTGC--AAAAGAAGGCAAAGA 2803111 Query 68087 ---CCATA-CTTTG-TATTCAAANNNNNNNNNNNNNNNNNNNNNNNNGGTATTCATTTAG 68141 ||||| |||| ||| | || | ||||| Sbjct 2803110 TTTCCATATGTTTGCGCCTCATA-------CAATTTATAAAGAATACGGCGTCACTTTAG 2803058 Query 68142 ATGAGATGGATATGAATGAATGGTACGACAAGTTAGTTAATGACCGAGACATTAAGAAGC 68201 |||| || | | |||||| ||||| | | ||| | ||| | | || | || Sbjct 2803057 ATGATATTAACTTAGATGAATATTACGATGAACTTGTTGCTAACCCAAATGTTGATAAAA 2802998 Query 68202 GTAAACTAGATGCACGTGACATGTTAACTACTATTGCGAAGACTCAATTAGCATCTGGAT 68261 ||| |||||||||||| ||| | | || ||||| | || |||||| ||| || | Sbjct 2802997 AGAAAAAAGATGCACGTGAAATGCTGAATATGATTGCACAAACACAATTACAATCAGGTT 2802938 Query 68262 ACCCATACTTCATGTATCGTGATAATGCAAACAAACTGCAT--CACTTAGGAGATTTAGC 68319 | ||||| || |||| | ||||||||||||||| ||||| | | || ||| | Sbjct 2802937 ATCCATATTTAATGTTTAAAGATAATGCAAACAAAGTGCATGCTAACTCTGACATT--GG 2802880 Query 68320 ACCTGTACGAATGAGTAATCTTTGTACCGAAATTTTCCAAGCGCAAACAGAATCAGACAT 68379 || | ||||||||| | ||||| |||||||||||| | || ||| | | Sbjct 2802879 ACAAATTAAAATGAGTAACTTATGTACTGAAATTTTCCAATTAC-AAGAGACTTCTATTA 2802821 Query 68380 TCAAGGTTACAATGGTGTTGACACATTCGGTTA----TGATATCTCATGTAATCTAGGGT 68435 |||| | | |||| ||| | || ||| ||| |||||||||||| |||| | Sbjct 2802820 TCAA--TGATTATGGCACTGA-AGATGAAATTAAACGTGACATCTCATGTAATTTAGGTT 2802764 Query 68436 CATTAAACCTTGTACGAATGATTGA-AGAAGCATTTAAACGTGGTAGCATCGAAGAATCT 68494 ||||||| | || |||| ||| ||| || |||| || |||| || Sbjct 2802763 CATTAAATATCGT--TAATG--TGATGGAATCA---------GGTAAATTCAAAGACTCA 2802717 Query 68495 GTATCTACAGGTATTTGGGCTTTAACAACTGTTGCAGACGACACATCAATTGATGAAGTA 68554 ||| || ||||| |||||||| |||| || || | ||| | | | | Sbjct 2802716 GTACACACTGGTATGGATGCTTTAACGGTTGTTAGTGATGAAGCGGATATTCAGAATGCA 2802657 Query 68555 CCATCGGTTAAGAAAGCTAACGATGACATGCATTCGGTTGGTCTAGGTGTAATGAACTGG 68614 || |||| |||||||| || | ||||| || || ||||||||||||| Sbjct 2802656 CCTGGCGTTAGAAAAGCTAATAGGGAGTTACATTCAGTAGGATTAGGTGTAATGAATCTA 2802597 Query 68615 CATGGTCTA-TTAGCTAAAAACTTCATGGTGTATGGAAGTGAAGAATCTATTGACTTAGC 68673 ||||| ||| ||||||||||| || | |||| | ||||||| | | || || || Sbjct 2802596 CATGG-CTACTTAGCTAAAAATAAAATTGGTTATGAATCTGAAGAAGCGAAAGATTTCGC 2802538 Query 68674 AAACGTACTAGGTGCAATGATTCGCTACTACTCTCTTAAAACTTCAATGGAGATTGCTAA 68733 |||| | | | ||||| ||| || || || || ||||||||| |||||||| Sbjct 2802537 AAACATTTTCTTTATGATGATGAACTATTATTCCATTGAACGTTCAATGGAAATTGCTAA 2802478 Query 68734 AGAGAGAAAGCAAACATTCAAACACTTTGATAA 68766 ||| ||| | || || ||| |||| || || Sbjct 2802477 AGAAAGACAAGAAGTATATAAAGACTTCGAAAA 2802445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540265731677120