Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq46 159 5e-34 >seq46 Length=4728336 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||||||||||| |||||||| || | || || |||| | | Sbjct 1480598 TGCAAATCTTTGTGAAAACATTAACAGGGAAAACAATCACCTTGGAAGTCGAACCTTCTG 1480539 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||| |||||| |||||| ||| |||||||| || || || ||||| | Sbjct 1480538 ATACAATTGAAAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCAGC 1480479 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | |||||||| || |||||| | || ||| | | || ||| ||||||| |||| Sbjct 1480478 AGAGATTGATTTTTGCCGGCAAACAACTTGAAGATGGTCGTACATTATCAGATTACAATA 1480419 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || |||| | || ||| | | |||||||||| Sbjct 1480418 TCCAAAAAGAATCCACACTCCACCTTGTTTTAAGGCTCAGAGGAGGTA 1480371 Score = 149 bits (164), Expect = 1e-30 Identities = 178/239 (74%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 ||||||| || | ||||| |||| ||||| || || ||| | || || || | || | Sbjct 1481282 TGCAAATTTTTGTTAAAACTCTAACCGGAAAGACCATAACTTTAGAAGTCGAGCCATCA- 1481224 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || |||||| ||||||| ||| |||||||||| |||||||||||||| || || || Sbjct 1481223 GACACTATTGAAAATGTCAAAGCTAAAATACAAGACAAAGAAGGCATTCCCCCAGACCAG 1481164 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || || |||||||| || |||||| | || ||| | ||| | |||||||||| Sbjct 1481163 CAGAGGCTGATTTTTGCCGGAAAACAACTCGAGGATGGGCGTACGCTCTCAGATTATAAC 1481104 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || ||||| ||||||||| | ||||| || | | || |||||||||| ||||||| Sbjct 1481103 ATTCAAAAGGAATCGACTTTGCATTTGGTTCTCAGGTTGAGAGGAGGTATGCAAATATT 1481045 Score = 129 bits (142), Expect = 9e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| ||||| || |||||||||||| | || ||||||| | Sbjct 1463881 TGCAAATCTTTGTTAAAACCTTAACTGGTAAAACAATTACTTTGGAAGTAGAACCATCTG 1463822 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| ||| || || ||||||||| ||||| || ||||| | Sbjct 1463821 ACACAATTGAAAATGTGAAAGCTAAGATCCAGGATAAAGAAGGTATTCCTCCAGATCAGC 1463762 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || || ||||| ||||||||| | || ||| | |||| | | || || || | Sbjct 1463761 AAAGGCTTATCTTTGCCGGTAAACAACTTGAAGATGGTCGAACTCTTTCCGACTACAACA 1463702 Query 146212 TACAAAAAGAATCGAC 146227 | || ||||||||||| Sbjct 1463701 TTCAGAAAGAATCGAC 1463686 Score = 123 bits (136), Expect = 4e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| ||||||||||| || || ||| |||| || |||| | Sbjct 1480826 TGCAAATCTTTGTGAAAACTTTAACAGGAAAGACGATCACTCTTGAAGTCGAACCATCGG 1480767 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||||| || ||||||||| || ||||| || || | Sbjct 1480766 ATACGATTGAAAATGTCAAAGCGAAAATTCAGGATAAAGAAGGTATCCCACCAGACCAGC 1480707 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| ||||| ||||| || ||||| ||| | || | | |||||||| | Sbjct 1480706 AGAGGCTCATCTTTGCCGGTAAGCAGTTAGAAGATGGGCGCACTCTTTCTGATTATAACA 1480647 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || |||||||| ||| | ||| Sbjct 1480646 TCCAGAAAGAATCCACTCTTCAT 1480624 Score = 120 bits (132), Expect = 5e-22 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||| || ||||| || || || ||||| |||| ||||| | | || Sbjct 1481738 TGCAGATCTTCGTAAAGACTTTAACCGGCAAGACTATTACACTTGAAGTAGAGCCTTCCG 1481679 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || || || ||| ||||||||| || || || ||||| | Sbjct 1481678 ACACTATTGAAAATGTCAAGGCAAAGATCCAAGATAAAGAAGGAATCCCCCCAGATCAGC 1481619 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | ||||| || || ||||| | || ||| | |||| | | || ||||| | Sbjct 1481618 AGAGGTTGATTTTCGCTGGAAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTATAACA 1481559 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || |||| | || || |||| |||||||| Sbjct 1481558 TTCAAAAAGAATCAACCCTCCACCTTGTGTTGAGATTGAGAGGAGG 1481513 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| |||| || || ||||| ||||| || ||| |||| || |||| || Sbjct 1481054 TGCAAATATTCGTAAAGACTTTGACAGGCAAAACCATCACTCTTGAGGTCGAACCATCCG 1480995 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || || || || |||||||||||| ||||| ||||||| Sbjct 1480994 ACACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGCATCCCACCAGATCAAC 1480935 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || || || || ||||| || || ||| | || | | || || |||| Sbjct 1480934 AGAGGTTAATCTTCGCTGGAAAACAGTTGGAAGATGGACGCACTCTTTCGGACTACAATA 1480875 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | || | || || | | |||||||||| Sbjct 1480874 TTCAAAAAGAATCCACCCTTCACCTCGTTTTGAGGCTGAGAGGAGGTA 1480827 Score = 114 bits (126), Expect = 2e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | |||||||| || || ||| | || || || | | | Sbjct 1481510 TGCAGATCTTCGTGAAGACTCTTACAGGAAAGACCATCACTTTGGAAGTCGAGCCTTCTG 1481451 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||| || ||| |||||| || ||||| || ||||| | Sbjct 1481450 ATACAATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAGC 1481391 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | ||||||||||| || ||| | || || |||| | | |||||||| | Sbjct 1481390 AGAGGTTGATTTTTGCAGGAAAGCAACTTGAAGACGGCCGAACACTTTCCGATTATAACA 1481331 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| || ||||| | ||||| |||| ||||||| Sbjct 1481330 TTCAGAAAGAATCTACCCTCCATCTTGTATTGAGATTGCGAGGAGG 1481285 Score = 93.3 bits (102), Expect = 7e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| ||||| || |||||||| || | || ||||||| | Sbjct 1463653 TGCAAATTTTTGTTAAAACCTTAACTGGTAAAACAATCACCTTGGAAGTAGAACCATCTG 1463594 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| ||| || ||| |||||| || ||||| || ||||| | Sbjct 1463593 ACACAATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAGC 1463534 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185 | || | ||||||||||| || ||| | || || Sbjct 1463533 AGAGGTTGATTTTTGCAGGAAAGCAACTTGAAGA 1463500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786152622433840