Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq46 170 1e-37 >seq46 Length=4728336 Score = 170 bits (188), Expect = 1e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || ||| | || || || |||||||||||||||||||| || | | Sbjct 1481513 CCTCCTCTCAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAA 1481572 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| || || ||||| ||||| | ||||| || |||||||| || || Sbjct 1481573 AGGGTTCGACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGG 1481632 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||| ||||| | ||| |||||| |||| | |||||| ||| | |||||| Sbjct 1481633 ATTCCTTCTTTATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACT 1481692 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| ||||| ||||| || || || || |||||||| Sbjct 1481693 TCAAGTGTAATAGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || |||||||| | || ||||| ||||||||||||||||| | Sbjct 1481057 CCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGAG 1481116 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| ||||||||||| || ||| | |||| || ||||| || || ||| Sbjct 1481117 AGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGA 1481176 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||||| ||| ||||||| |||| | |||||| || | || ||| Sbjct 1481177 ATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGACT 1481236 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | |||||| || || || |||| ||||||||||| || ||||| Sbjct 1481237 TCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 161 bits (178), Expect = 8e-35 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || |||||||| |||||||| || || | || || ||| ||| || |||||| Sbjct 1463680 TGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCGACCATCTTCAAGTTGT 1463739 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| | || | ||||||||||| || |||||||| ||||| || || | || Sbjct 1463740 TTACCGGCAAAGATAAGCCTTTGCTGATCTGGAGGAATACCTTCTTTATCCTGGATCTTA 1463799 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||| ||| |||| | |||||||| |||||||||| | ||| || ||||| |||||| Sbjct 1463800 GCTTTCACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAAGTAATTGTTTTACCAGTT 1463859 Query 29764 AAGGTTTTAACAAATATCTGCATT 29787 |||||||||||||| || |||||| Sbjct 1463860 AAGGTTTTAACAAAGATTTGCATT 1463883 Score = 156 bits (172), Expect = 3e-33 Identities = 159/205 (78%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || |||||||||||||| || || ||||| | | || ||| ||| || |||||| Sbjct 1480397 TGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAATGTACGACCATCTTCAAGTTGT 1480456 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||| ||| | |||||||| |||||||| || || ||||| ||||||||||| |||||| Sbjct 1480457 TTGCCGGCAAAAATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTG-AATTTT 1480515 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||| || |||| | || |||||| |||| ||||| | || || ||||| || || Sbjct 1480516 AGCTTTTACGTTTTCAATTGTATCAGAAGGTTCGACTTCCAAGGTGATTGTTTTCCCTGT 1480575 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 ||| ||||| ||||| || |||||| Sbjct 1480576 TAATGTTTTCACAAAGATTTGCATT 1480600 Score = 136 bits (150), Expect = 3e-27 Identities = 126/157 (80%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || ||||| || || ||| | ||||| || |||||||| || |||||||||||||| Sbjct 1463500 TCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCTTTA 1463559 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | ||| ||| |||| | |||||||| |||||||||| | || || Sbjct 1463560 TCTTG-AATCTTAGCTTTAACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAGGTGAT 1463618 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| |||||||||||||||||||| || |||||| Sbjct 1463619 TGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCATT 1463655 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | ||| || ||||| || || || ||||| ||||||||||||||||||| Sbjct 1481741 CCACCTCTGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAG 1481800 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || ||||| |||||||| | |||| ||||| || || ||||| Sbjct 1481801 AGAGTTCTACCATCCTCAAGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGG 1481860 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| |||||||| || | ||| || ||| | || | || || ||| | || ||| Sbjct 1481861 ATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAATTGTATCTGAAGGCTCAACT 1481920 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || | || || ||||| || || || ||||| ||||| ||||||||| Sbjct 1481921 TCCAATGTGATGGTTTTTCCGGTCAAAGTTTTCACAAAGATCTGCATT 1481968 Score = 134 bits (148), Expect = 1e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| ||||||||||| || ||||||||||| | || ||||| ||| Sbjct 1480616 AGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAAAGAGTGCGCCCATCT 1480675 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | || || || ||| | || | || ||||| || || || ||||| ||||| || Sbjct 1480676 TCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCTTCTTTATCC 1480735 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || |||||| | ||||||| |||| | || || || |||| ||||||||||| || || Sbjct 1480736 TG-AATTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCGACTTCAAGAGTGATCGT 1480794 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| ||||| || ||||| Sbjct 1480795 CTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480827 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||| | || || | ||| || || |||||||| |||||||||||||| | | Sbjct 1481285 CCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAA 1481344 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || || ||||| || || ||| | ||||| || |||||||| || ||| Sbjct 1481345 AGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGA 1481404 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||||| ||||| ||| || | ||| ||| |||| | || |||||| | || || Sbjct 1481405 ATACCCTCTTTATCTTG-AATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCTCGAC 1481463 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || || || || | || || || || |||||||| Sbjct 1481464 TTCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || || | || || |||||||||||||| ||||| || || | | Sbjct 1570255 CCTCCTCTCAACCTCAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAA 1570196 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| ||||| || || || || | |||||||| ||||| || || ||| Sbjct 1570195 AGCGTACGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGA 1570136 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| ||||||| | || | ||||| || | || ||| Sbjct 1570135 ATTCCTTCCTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCCGATGGCTCAACT 1570076 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | ||| || || || ||||| | || || || || ||||||||||| Sbjct 1570075 TCCAAAGTGATTGTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCATTTT 1570026 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||| | || || | ||||| ||||||||||||||||| || || |||| | Sbjct 1480829 CCTCCTCTCAGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCGAA 1480888 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || | ||||| ||||| | || || || || ||||| || || Sbjct 1480889 AGAGTGCGTCCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGTGGG 1480948 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| || || ||| || | || ||| |||| | ||||| || |||| || Sbjct 1480949 ATGCCTTCTTTATCCTG-AATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGAC 1481007 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || |||||||| || || || || || ||||| ||||| Sbjct 1481008 CTCAAGAGTGATGGTTTTGCCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 29556 TTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC 29615 ||| ||||| | | | ||| || | || || || |||||||| ||||| || ||||| Sbjct 1479913 TTGGCCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATC 1479972 Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675 | | || ||| ||| || ||||| ||||| ||| | || | ||||||||||| || Sbjct 1479973 GGAGAGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGG 1480032 Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 ||||| || ||||| ||||| | ||| ||| || |||| | || || || | || Sbjct 1480033 GGGAATTCCTTCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTC 1480092 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| || ||||||||||| || || || || || |||||||| Sbjct 1480093 GACTTCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 120 bits (132), Expect = 2e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| ||||||||||| || ||||| ||||||| || ||||| || || | ||| Sbjct 1480168 ATGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAAAGTGTGCGTCCGTCTTCCAATTG 1480227 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 || |||||| | || || || ||||| || || || || || || || || || ||| | Sbjct 1480228 CTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTATCCTG-AATCT 1480286 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | ||||||| | || | |||||||| | || ||||| || || || || || || | Sbjct 1480287 TAGCTTTGACATTATCAATGGTGTCAGATGGCTCGACTTCGAGGGTGATTGTCTTTCCTG 1480346 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 |||| ||||| ||||| || ||||| Sbjct 1480347 TTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || || ||||||||||| ||||| || || | || || || ||| Sbjct 1570468 AGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCATCC 1570409 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || || || ||| | |||||||| ||||| || || ||||| || || |||||| Sbjct 1570408 TCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 1570349 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || |||||| | || | || || || |||| ||||| | || || || Sbjct 1570348 TGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACTTCCAAGGTGATGGTC 1570289 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| | ||| || || || |||||||| Sbjct 1570288 TTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Score = 89.7 bits (98), Expect = 4e-13 Identities = 119/163 (73%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || |||||||| |||||||||||||||| || ||||| ||| || | || Sbjct 1463907 ATGAAGTGTTGATTCTTTCTGAATGTTATAATCCGAAAGAGTGCGTCCATCTTCCAACTG 1463966 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| || || | || || || || ||||| || || || || ||||| || || ||| | Sbjct 1463967 TTTTCCGGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCTTTATCCTG-AATCT 1464025 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAG 29744 | | || ||| |||| | ||||| || |||| || ||||| Sbjct 1464026 TGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGACCTCAAG 1464068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385212617807682