Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq89 93.3 5e-14 >seq89 Length=3091062 Score = 93.3 bits (102), Expect = 5e-14 Identities = 194/284 (68%), Gaps = 9/284 (3%) Strand=Plus/Minus Query 40137 ATGTCAGGATACATTCGTTTACTTGCACATTCCAATGCAAGTTGTTTGATGTCATAATTC 40196 || ||||||||||||| |||| | | || || ||||| | |||||| || ||||||||| Sbjct 556794 ATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATTC 556735 Query 40197 ACATCAGTTGGATGAAGGTTAATTCCTTCTTCAACAAACATAACGAGCTTAGGAAAAATT 40256 ||| | | | || || | |||| || || | | || || || || || || Sbjct 556734 GGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGATG 556675 Query 40257 GGAGTGATTCCGTCTCGTCCAAGGCCTTTGATTCTATTTTTGAGAATAGCTTTTTGAATC 40316 | ||| || | ||| || | |||||||||||| | || ||||| |||| ||| || Sbjct 556674 GCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGATT 556615 Query 40317 ATACGTTCATA---ATCGCTTGTGCC-AGTACCAAACGTAATTGTCACGAATGGAGTTTG 40372 |||| ||| ||| ||| || | | | || | ||| ||| || || || ||||| Sbjct 556614 TTACGGCTATATGTATC---TGTTCCTAATCCAAATCCTAA-TGTTACAAAAGGTGTTTG 556559 Query 40373 ACCATTTGAGCTGAACAGAGTATTGACTTCATATTCATAAGCTT 40416 ||||||||| | ||| || || | ||||||||| ||| ||| Sbjct 556558 ACCATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554345484925120