Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq3 120 4e-22 >seq3 Length=17889087 Score = 120 bits (132), Expect = 4e-22 Identities = 213/305 (70%), Gaps = 7/305 (2%) Strand=Plus/Plus Query 180553 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 180612 ||| ||| | || || ||||||||||||| ||||| ||| ||||| | |||| || Sbjct 15711935 AGGGGATCTTGGGCCTGTTTATGGATTTCAGTGGAGGCATTTCGGAGCCGATTATAAAGA 15711994 Query 180613 CTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACTAT 180672 | | || | || | || |||||| | |||||||||| || ||| | ||||| Sbjct 15711995 CATGCACACAGATTACACAGGACAAGGTGTCGACCAATTAATGGCTGTAATAAACACTAT 15712054 Query 180673 AAAAAATAATCCCGAATG-CCGAAGAATAATCATAGATAGTTGGAAT-GTATCACAATTA 180730 |||| |||||| |||| |||||| || || || |||||| ||| || ||| Sbjct 15712055 TAAAACCAATCCC-AATGACCGAAGGATGATTATGTGCGCCTGGAATCCTAT-GCATTTA 15712112 Query 180731 CCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAAATT 180790 | |||||||| || || || || ||||||||||||||||||||| |||| Sbjct 15712113 GACAAGATGGCTCTACCCCCTTGCCATTGTTTGGTACAATTTTATGTTGCAAAT---GGC 15712169 Query 180791 TATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAAT 180850 | ||| |||||| ||||||| ||||| ||||| | || ||||| || |||| ||| Sbjct 15712170 GAATTATCTTGCCAGCTGTATCAGAGATCGGCAGACATGGGCTTAGGAGTTCCATTTAAC 15712229 Query 180851 ATTGC 180855 ||||| Sbjct 15712230 ATTGC 15712234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655268516218000