Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq157 280 2e-70 >seq157 Length=245904 Score = 280 bits (310), Expect = 2e-70 Identities = 739/1119 (66%), Gaps = 18/1119 (2%) Strand=Plus/Plus Query 27916 GATGCGCGACCGTTGTCAAATGCTTTCAT-GATATCGTCATCTGGGTTCAGACGAACACC 27974 ||||| |||||||| | || | | ||| || | ||| |||| ||||| || ||||| Sbjct 52845 GATGCCCGACCGTTTTTGAA-GATCTCAGCGACGTTGTCGTCTGCTTTCAGGCGTACACC 52903 Query 27975 ACAAGCACCTTCAACGTAAAGAATCGGAGCGACGCTGGCTTTAACGCCACGCAGACGATC 28034 || |||||||| | || || ||||||||||| | |||||| ||| || ||| | Sbjct 52904 GCAGGCACCTTCCATATACAGGATCGGAGCGACACGGGCTTTGACGTTTTCCAAACGCGC 52963 Query 28035 AACGCGAGCCATCAAAGCTTGCTTGGTGATTTCCATACGTTCTTCCAGAAGATCCCAGAA 28094 | ||| | |||||| |||| || | | || || ||| | ||||| || | |||||| Sbjct 52964 GATGCGCGTCATCAACGCTTTTTTCGCCAGTTGCAGACGATTATCCAGCAGGTTCCAGAA 53023 Query 28095 ACGCATAGGATTGCCATTTGAATCAAGAGCGATTCGCGGCAAGTTCAGAGTGACCACACC 28154 |||| ||| | | || || ||||| ||||||| ||| || ||| || || Sbjct 53024 ACGCTCTTCGTTGTGTTCCGCTTCCAGCGCGATGCGCGGCAGGTTGAGGCTGATTACCCC 53083 Query 28155 CAAGTTGTTACGGCCTTCATGAACTTCAACACCGTTTTCGTCTTCCCAGCGATGCAAGAA 28214 | |||||| || || || || | | || | ||| || | | || | | ||| Sbjct 53084 GAGGTTGTTGCGACCATCGTGGATCTGCTTGCCCTCTTCCTCATACACGCCAAGGAAG-- 53141 Query 28215 ACTACGGCATCCCATTGGGAATTTGAAACTA-CCAGTCACTTCAACGATCTTATCATAGC 28273 || |||| ||||| ||| | | |||| | || || || | ||| | || ||| || Sbjct 53142 -CTGTGGCAGCCCAT-GGGCGTCTTAAACGAGCCGGTAACCTTAACAACCTGATCGTAAT 53199 Query 28274 TCAGAATGTCCGGATACATACGTTTCGCAGCGCATTCCAGAGCCAACTGTTTGATACGAT 28333 | || || ||||| ||||| || || | ||| ||||| |||| || ||||| || Sbjct 53200 TGAGGATATCCGGGTACATCCGCTTGCTGGAGCAATCCAGTGCCAGTTGCTTGATGTCAT 53259 Query 28334 ACAGCGGATCAGTCGGGTTCAAGTTGTGTCCGTCTTTCAGAGCGAATACCAGTTTCGGGA 28393 | |||||| | | || ||| ||||| | |||||| |||||||| |||| Sbjct 53260 AGTTCGGATCGGCAGCCTTGTGATTGACACCGTCGCGGATAGCGAACACCAGTTTGGGGA 53319 Query 28394 AAACAGGGGTGATACCCTCTTTACCAAGACCAGCCAAACGAACTTTCAGGATTGCTTCTT 28453 | || | || ||| | ||| || ||||| || | ||| |||||| | || | Sbjct 53320 ACACCGCAGTTTTACGGTTTTTGCCCAGACCGGCAATACGGTTGCGCAGGATGGATTGCT 53379 Query 28454 GAATCAGTTCTGACTCCCAGCTAGTACCAAGACCAAAGCCGAAGGTACAGAACGGAGTTT 28513 | ||||| || ||||| || || || || | || || ||||| |||||| || | Sbjct 53380 GGATCAGACGCGATTCCCAACTGGTGCCGAGGTCGAAACCAAAGGTGACGAACGGCGTCT 53439 Query 28514 GACCATTTGCGGAGTGCAGAGTGTTGACCTCATACTCCAGACCTTGCATAGCATCATATA 28573 ||||||| || | |||||| || || || ||||| ||||| || | || || || Sbjct 53440 GACCATTGGCAGTGTGCAGCGTATTTACTTCATATTCCAGCGACTGGAAGGCGTCGTAGC 53499 Query 28574 CAGCTTTG--CGAGTCTTTGCAATAGCATATTGCTGTTGATCTGGAATTTTCCAGTAACG 28631 || | |||| | ||| || | || ||| ||||| | ||| | | Sbjct 53500 ACTCTAGGTACGAGACAGCGCATAGGCGTCC-GC-----ATCGGGAATGTGCCACTCATC 53553 Query 28632 AGCTTCATCCAAGTGCTTTTCGTGTGTCATTTTAACATACGGTGCCAGCACTTCGTCAAT 28691 ||| ||| |||||||| || | | || |||||||||| | ||| || || Sbjct 53554 AGCGGTTTCCCGGTGCTTTTTATGGCTAGCGGTGACGAACGGTGCCAGAATTTCATCGAT 53613 Query 28692 GCGATTGATTGTGTTACCGCCATAAATGTGACTTGCTACTTGAGCGATGATTTGAGCAAT 28751 || || || ||| | ||||| || ||||| ||||| || || ||||||||||| || | Sbjct 53614 ACGGTTAATGGTGGTGCCGCCGTAGATGTGGCTTGCCACCTGCGCGATGATTTGGGCCGT 53673 Query 28752 CACGGCAGCAGCGGTAGAAATGCTTTTCGGAGTCTCGATTTGAGCATTACCCATTCTGAA 28811 ||| || | ||||| || ||| ||| || | ||| || | || |||||||| |||| Sbjct 53674 CACTGCCGTCGCGGTTGAGATGGATTTTGGCGGCTCAATCTCTGCGTTACCCATCTTGAA 53733 Query 28812 ACCACGTTTCAACATTCCTTCAACATCTATCAACATGCAGTTAAACATTGGGAAGAACGG 28871 || ||||||| ||||||| || || | ||| ||||| ||||| ||||||||||| Sbjct 53734 CCCTTTGGTCAACATGCCTTCAAGGTCGATAAGCATACAGTTGAACATCGGGAAGAACGG 53793 Query 28872 TGAATAATCAAGATCGTGGAAGTGAATCCAACCATTTTCGTGTGCTTGCATAACTTCAAC 28931 || || || ||||||||| ||||||| ||| ||| || || || || || Sbjct 53794 GGAGTAGTCCAGATCGTGGTAGTGAATTTCACCGCGTTCATGGGCAATCACCACGTCGCG 53853 Query 28932 AGGCAG---ATAATGCTTGGCGAAATGCTTACTAACGATACCAGCTACCAAATCGCGTTG 28988 ||||| || |||||||| | ||||| ||||||||| || | || ||||| || Sbjct 53854 CGGCAGGATATGTTGCTTGGCATAGTGCTTGGCAACGATACCGGCCAGCAGGTCGCGCTG 53913 Query 28989 AGTTGGAATTACCTTGGCGTCTTTGTTTGCATTTTCATT 29027 || || || || || ||||||||| || || || || Sbjct 53914 GGTAGGGATCACTTTACTGTCTTTGTTGGCGTTCTCGTT 53952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710278752146720