Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq89 102 9e-17 >seq89 Length=3091062 Score = 102 bits (112), Expect = 9e-17 Identities = 192/281 (68%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 124750 AAGCTTATGAGTATGAAGTAAATACTCTTTTTAGCTCAAACGGTCAAACGCCTTTTGTAA 124809 ||| ||| || |||||| | || || | | || ||||| |||||||| |||||||||| Sbjct 556516 AAGTTTA-GAATATGAAATTAACACATTGTATACATCAAATGGTCAAACACCTTTTGTAA 556574 Query 124810 CAATTACATTTGGTACTGGAACTGACTGGACTGAACGAATTATTCAGAAAGCAATTCTTA 124869 || | |||||| ||||| || | || | || || |||||||||||| Sbjct 556575 CATTAGGATTTGGATTAGGAACAGATACATATAGCCGTAAAATCCAACAAGCAATTCTTA 556634 Query 124870 AAAACCGCATTAAAGGCCTTGGTCGTGATGGAATAACTCCTATTTTCCCTAAACTTGTTA 124929 | | | || ||||| | ||| ||| | || ||| | || ||||| |||||||| Sbjct 556635 ACACTAGAATCAAAGGTTTGGGTAAAGATCGTATTACTGCCATCTTCCCAAAACTTGTGT 556694 Query 124930 TGTTCATTGAAGAGGGTGTCAATCTTTATAAAGACGACCCGAACTATGATATTAAGCAGC 124989 | | ||| || | || || ||| || | | || ||||| |||||||| || || Sbjct 556695 TTTCAATTAAAAAAGGCGTGAATTTTAGTTCGAAAGATCCGAATTATGATATAAAACAAT 556754 Query 124990 TTGCTCTAGAGTGTGCAAGCAAAAGAATGTATCCTGATATT 125030 | || ||||||| | | ||||||||||||||||||||| Sbjct 556755 TAGCATTAGAGTGCTCTACTAAAAGAATGTATCCTGATATT 556795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541136116423360