Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= NC_024391.1
Length=41941
Score E
Sequences producing significant alignments: (Bits) Value
seq89 158 3e-34
>seq89
Length=3091062
Score = 158 bits (174), Expect = 3e-34
Identities = 234/332 (70%), Gaps = 0/332 (0%)
Strand=Plus/Minus
Query 6389 AATGTTAAACAGAGTAATTTTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCAC 6448
|||| |||| ||||| ||||||| || || ||||| ||||| ||||||| |||| ||
Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573
Query 6449 GCCAAACGGCGTAAATGTAGGAACATTCACATTAGCAGTAAACAGAACATTCACGAATGC 6508
|| ||||| | ||| | || || || ||||||||||| | || || || |||||
Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513
Query 6509 TCAAGGCGAGCGTGAAGCAGACTTTATAAACGTAGTAGTGTTCAAAAAACAAGCTGAAAA 6568
||||| || || |||||||| || || || || || || | ||||||||| || ||
Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453
Query 6569 TGTTAAAAAATACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGACGACTACAAACACG 6628
||| || || ||| | | ||||| | || || || ||||| || | ||| ||||
Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393
Query 6629 TAATTACGACAACAAAGTTGGGCAACGTGTATATGTTACAGAGGTAGTAGCGGACAGTGT 6688
|| || || ||| ||| || | ||||| | ||| || || ||||| || || ||
Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333
Query 6689 TCAATTCTTAGAACCGAAGAATAGCAACCAAC 6720
||||||| | ||||| || ||| |||||||
Sbjct 140332 TCAATTCCTTGAACCTAAAAATCAAAACCAAC 140301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134087367575772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |