Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_024391.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq89 158 3e-34 >seq89 Length=3091062 Score = 158 bits (174), Expect = 3e-34 Identities = 234/332 (70%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 6389 AATGTTAAACAGAGTAATTTTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCAC 6448 |||| |||| ||||| ||||||| || || ||||| ||||| ||||||| |||| || Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 6449 GCCAAACGGCGTAAATGTAGGAACATTCACATTAGCAGTAAACAGAACATTCACGAATGC 6508 || ||||| | ||| | || || || ||||||||||| | || || || ||||| Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 6509 TCAAGGCGAGCGTGAAGCAGACTTTATAAACGTAGTAGTGTTCAAAAAACAAGCTGAAAA 6568 ||||| || || |||||||| || || || || || || | ||||||||| || || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 6569 TGTTAAAAAATACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGACGACTACAAACACG 6628 ||| || || ||| | | ||||| | || || || ||||| || | ||| |||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 6629 TAATTACGACAACAAAGTTGGGCAACGTGTATATGTTACAGAGGTAGTAGCGGACAGTGT 6688 || || || ||| ||| || | ||||| | ||| || || ||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 6689 TCAATTCTTAGAACCGAAGAATAGCAACCAAC 6720 ||||||| | ||||| || ||| ||||||| Sbjct 140332 TCAATTCCTTGAACCTAAAAATCAAAACCAAC 140301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134087367575772