Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq46 197 3e-45 seq69 122 2e-22 >seq46 Length=4728336 Score = 197 bits (218), Expect = 3e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| ||| | || || | || || |||||||||||||| || |||||||| || Sbjct 1481285 CCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAA 1481344 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||| |||||||| ||||| ||||| ||||| || | || || ||||||||||| Sbjct 1481345 AGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGA 1481404 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || |||||||||||||| ||||| ||||||||||| |||||| ||| || ||| Sbjct 1481405 ATACCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCTCGACT 1481464 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || ||||| ||||| | ||||| || || |||||||| Sbjct 1481465 TCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | | ||| || | ||| ||||||||||||||||| ||||| ||||| || Sbjct 1479917 CCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAG 1479976 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| ||||| || || |||||||| || ||||| |||||||| || Sbjct 1479977 AGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGA 1480036 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| |||||||| || || |||||||| |||||||| ||||| || || ||| Sbjct 1480037 ATTCCTTCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTCGACT 1480096 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| || || ||||| ||||| ||||| || || |||||||| Sbjct 1480097 TCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||||||| | || || | ||| || || |||||||| || || ||||| ||||| Sbjct 1481513 CCTCCTCTCAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAA 1481572 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||| ||| ||||| || ||||||||||| || || | || || |||||||| || Sbjct 1481573 AGGGTTCGACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGG 1481632 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| |||||||| |||||||| || ||||||||||| || || ||| |||||| Sbjct 1481633 ATTCCTTCTTTATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACT 1481692 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| || || |||||||| || |||||||| Sbjct 1481693 TCAAGTGTAATAGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | | || || | ||| || || ||||||||||| || || || || || Sbjct 1463656 CCACCTCTGAGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAA 1463715 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| ||| ||| ||||| |||||||| || |||||||| || ||||| ||||||||||| Sbjct 1463716 AGAGTTCGACCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAGGA 1463775 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| ||||| || ||||| ||||| ||||||||||| || ||| ||||||||| Sbjct 1463776 ATACCTTCTTTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCTACT 1463835 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || || || || || || || || ||||| || |||||| Sbjct 1463836 TCCAAAGTAATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCATT 1463883 Score = 185 bits (204), Expect = 2e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||| | | | ||| | ||| || || |||||||| || ||||| ||||| | Sbjct 1480371 TACCTCCTCTGAGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATCTG 1480430 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||| ||||| |||||||| || ||||| || | ||| || |||||||||| Sbjct 1480431 ATAATGTACGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTGGAG 1480490 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || |||||||| || |||||||| |||||||| |||||| |||||| | Sbjct 1480491 GGATACCTTCTTTGTCTTGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAAGGTTCGA 1480550 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||||| || || || || ||||| || || || ||||| || |||||| Sbjct 1480551 CTTCCAAGGTGATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCATT 1480600 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||| | || ||| | ||| || || |||||||| || ||||| || || | Sbjct 1480827 TACCTCCTCTCAGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCG 1480886 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || ||||| | ||||||||||| ||||||| || ||||||||||| | Sbjct 1480887 AAAGAGTGCGTCCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGTG 1480946 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| ||||| |||||||| || || ||||||||||| || || ||||| | Sbjct 1480947 GGATGCCTTCTTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGA 1481006 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | ||| || || ||||||||||| |||||||| ||||| ||||| Sbjct 1481007 CCTCAAGAGTGATGGTTTTGCCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||| || || ||||||||||| ||||| || || || |||||||| || Sbjct 1481741 CCACCTCTGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAG 1481800 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| ||||||| || || ||||| || ||||| || || || |||||||| ||||| || Sbjct 1481801 AGAGTTCTACCATCCTCAAGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGG 1481860 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || || || || || || || ||||| ||||| ||||| ||| || ||| Sbjct 1481861 ATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAATTGTATCTGAAGGCTCAACT 1481920 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 ||||| || || || || || ||||| || || ||||| ||||||||| || Sbjct 1481921 TCCAATGTGATGGTTTTTCCGGTCAAAGTTTTCACAAAGATCTGCATTGTT 1481971 Score = 172 bits (190), Expect = 1e-37 Identities = 160/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| ||||||||||| || ||||||||||| ||| | | || ||||||| || Sbjct 1480625 TGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAAAGAGTGCGCCCATCTTCTAACTGC 1480684 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| || || || || ||||| || || ||||| ||||| ||||| || Sbjct 1480685 TTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCTTCTTTATCCTGAATTTTC 1480744 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||||||||||||||| ||||| ||||| | ||| |||||||| ||||| Sbjct 1480745 GCTTTGACATTTTCAATCGTATCCGATGGTTCGACTTCAAGAGTGATCGTCTTTCCTGTT 1480804 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 || || || ||||| || ||||| Sbjct 1480805 AAAGTTTTCACAAAGATTTGCAT 1480827 Score = 163 bits (180), Expect = 6e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||||||| | || ||| | ||| || || |||||||| || || || || |||| Sbjct 1570257 TACCTCCTCTCAACCTCAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAG 1570198 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| || || || || ||||| || ||||| | ||| || || ||||| | Sbjct 1570197 AAAGCGTACGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGG 1570138 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| ||||| || || ||||| ||||| ||||| || || || || | Sbjct 1570137 GAATTCCTTCCTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCCGATGGCTCAA 1570078 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||||| || ||||| || || | ||||| || || ||||||||| Sbjct 1570077 CTTCCAAAGTGATTGTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCATT 1570028 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||||||| | ||||| || |||| ||| ||||| || || || |||||||| | Sbjct 1481055 TACCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTG 1481114 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || || || ||||||||||| ||||| || || || || || ||||| | Sbjct 1481115 AGAGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGG 1481174 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||| || || ||||| ||||||||||| || || || || | Sbjct 1481175 GAATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGA 1481234 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| |||||||| ||||| || || | || || ||||| || ||||| Sbjct 1481235 CTTCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 159 bits (176), Expect = 7e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| ||||||||||| || || ||||| || || | | |||||||| | ||| Sbjct 1480169 TGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAAAGTGTGCGTCCGTCTTCCAATTGC 1480228 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||||||||| |||| || || || |||||||| || ||||||||||| |||||||| Sbjct 1480229 TTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTATCCTGAATCTTA 1480288 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||| ||||| || ||| || || ||||| | || || ||||| ||||| Sbjct 1480289 GCTTTGACATTATCAATGGTGTCAGATGGCTCGACTTCGAGGGTGATTGTCTTTCCTGTT 1480348 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 || || || ||||| || ||||| Sbjct 1480349 AAAGTTTTCACAAAGATTTGCAT 1480371 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | | || || ||||| || || |||||||| || || || || ||||| Sbjct 1570483 CCTCCTCTAAGCCTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAA 1570424 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || || || || || ||||| |||||||| | ||| || || ||||| || Sbjct 1570423 AGAGTACGTCCATCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGA 1570364 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| ||||| ||||| || || ||||| ||||| ||||| ||||| ||| Sbjct 1570363 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACT 1570304 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| || || | ||||| || || |||||||| Sbjct 1570303 TCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Score = 143 bits (158), Expect = 5e-29 Identities = 127/159 (80%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 |||||||| ||||| ||||| ||||| || | || || ||||||||||| || || || Sbjct 1463497 CCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCT 1463556 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 |||||||||||||| ||||| ||||||||||| || ||| |||||||||||||| || Sbjct 1463557 TTATCTTGAATCTTAGCTTTAACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAGGTG 1463616 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || || || || || || || ||||| || |||||| Sbjct 1463617 ATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCATT 1463655 Score = 123 bits (136), Expect = 5e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||||||||| || |||||||| || ||| | | || ||||| | ||| Sbjct 1463908 TGAAGTGTTGATTCTTTCTGAATGTTATAATCCGAAAGAGTGCGTCCATCTTCCAACTGT 1463967 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| || ||||||| || ||||||||||| || || ||||| ||||| |||||||| Sbjct 1463968 TTTCCGGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCTTTATCCTGAATCTTG 1464027 Query 82728 GCTTTTACATTTTCAATCGTATC 82750 || || ||||||||||| || || Sbjct 1464028 GCCTTAACATTTTCAATTGTGTC 1464050 >seq69 Length=2547145 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| || || || || || ||| | || |||||||| || || || || || || | Sbjct 1551504 CTTTCTGGATGTTGTAGTCCGAAAGAGTCCTGCCGTCTTCGAGCTGCTTCCCGGCGAAAA 1551563 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | | || ||||| || || || || || ||||||||||| ||||| ||||| ||||||| Sbjct 1551564 TCAACCTCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGGATCTTGGCTTTGACATTTT 1551623 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||| || ||| | || || || | || || |||||||| || | ||||| |||| Sbjct 1551624 CAATTGTGTCAGACTGCTCGACCTCAAGGGTGATTGTCTTGCCCGTTAGGGTCTTCACAA 1551683 Query 82801 ATATCTGCAT 82810 | |||||||| Sbjct 1551684 AAATCTGCAT 1551693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981809563315278