Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq74 89.7 9e-13 >seq74 Length=3691182 Score = 89.7 bits (98), Expect = 9e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 183010 ACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCAT 183069 || ||||| |||||||||| | | || || ||| | | | |||||||||||||| Sbjct 1881519 ACGCATGATGATCTATGGAATTCGGCTCAGATCCAGTTAAATACTGAAGGAAAAATGCAC 1881578 Query 183070 AGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGAT 183129 |||| | | ||||| ||||| ||||| ||||| |||||||| | ||| |||||| Sbjct 1881579 GGTTTCCTGAGGATGTATTGGGCGAAAAAAATACTCGAATGGACCCAGAGTCCTGAAGAT 1881638 Query 183130 GCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAAC 183189 ||| |||| | | | || ||||| | |||||| |||| || | ||| || || Sbjct 1881639 GCTCTGAGAGTTGCTCTTTACTTGAACGACAAGTACAGCTTAGATGGGAGGGACCCAAAT 1881698 Query 183190 GGATACGTAGGT 183201 |||| ||| ||| Sbjct 1881699 GGATTCGTTGGT 1881710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903395367718720