Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq46 102 8e-17 seq105 87.8 2e-12 seq69 87.8 2e-12 >seq46 Length=4728336 Score = 102 bits (112), Expect = 8e-17 Identities = 146/201 (73%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || |||||||| |||||||||||| | ||| |||| || || || ||||||| Sbjct 1479947 GTAGATTCTTTCTGAATATTGTAATCG--GAGAGTGTACGACCATCTTCCAGTTGCTTGC 1480004 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | ||||||| ||||| || || || || ||||| || || ||| ||| || Sbjct 1480005 CGGCAAAGATGAGCCTTTGCTGATCTGGGGGAATTCCTTCTTTATCTTGGAT-TTTGGCT 1480063 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | |||| || || | ||||| || |||| |||| ||||||||| |||| | Sbjct 1480064 TTTACGTTTTCAATGGTATCTGATGGCTCGACTTCGAGAGTGATGGTTTTGCCAGTCAAA 1480123 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||||||| Sbjct 1480124 GTCTTGACGAAGATCTGCATG 1480144 Score = 98.7 bits (108), Expect = 1e-15 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| ||||| || || ||||| || | ||| ||| | |||||||||||||| | Sbjct 1570226 GGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGCGTACGACCA-TCCTCGAGCTGCTTTC 1570168 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | ||| | || | | ||||||||| || || || ||||||||||| ||| ||| || Sbjct 1570167 CGGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGAT-TTTAGCT 1570109 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | |||| ||||| | ||||| || || | |||| || || || || ||| Sbjct 1570108 TTGACATTGTCAATGGTGTCCGATGGCTCAACTTCCAAAGTGATTGTCTTTCCAGTAAGA 1570049 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 1570048 GTCTTCACGAAGATCTGCAT 1570029 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || || | || | | ||||||||| || || || ||||||||| Sbjct 1570411 TCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTG 1570352 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||||| || |||| || || || || | ||||| | Sbjct 1570351 TCTTGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACTTCCAAGGTGATG 1570292 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || ||||| |||||||| Sbjct 1570291 GTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| ||||| || |||||||| || | ||| | | | || || | ||| || | Sbjct 1480858 GGTGGATTCTTTTTGAATATTGTAGTCCGAAAGAGTGCGTCCA-TCTTCCAACTGTTTTC 1480916 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | || ||| || || || ||||||||||| || || ||||| || Sbjct 1480917 CAGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCTTTATCCTGAATCTTGGCCT 1480976 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| || || || || | |||| ||||||||| |||| || Sbjct 1480977 TAACATTTTCAATTGTGTCGGATGGTTCGACCTCAAGAGTGATGGTTTTGCCTGTCAAAG 1481036 Query 133642 TTTTTACGAAAATCTGCAT 133660 | |||||||| || ||||| Sbjct 1481037 TCTTTACGAATATTTGCAT 1481055 >seq105 Length=1502237 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 || ||||| || || | || |||||||| ||||| || ||||| |||| ||| ||| Sbjct 285623 TATTCTACTATTTCTGTACAAAGATTGCTACATTTAATGGTGCCCAAATTCTGTTGGTTG 285564 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTG 148981 || ||||||||||| || |||||||||||||| || | || ||||||||||| Sbjct 285563 GATTTTCTGTTGCACGCATCTTTGTACAGCATGTAAGGAACACCGGTTTCCACCTG 285508 >seq69 Length=2547145 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| ||||||||||| || ||| |||| | || ||| ||||| || ||||| || ||||| Sbjct 1551538 GTCTTCGAGCTGCTTCCCGGCGAAAATCAACCTCTGTTGGTCCGGTGGGATACCCTCCTT 1551597 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 || |||||| |||| | |||| ||||| | |||| || || | ||||| Sbjct 1551598 ATCTTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGACTGCTCGACCTCAAGGGTGAT 1551657 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || || || ||||||||||| Sbjct 1551658 TGTCTTGCCCGTTAGGGTCTTCACAAAAATCTGCAT 1551693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483412328050480