Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_024794.1 Length=167318 Score E Sequences producing significant alignments: (Bits) Value seq89 107 2e-18 >seq89 Length=3091062 Score = 107 bits (118), Expect = 2e-18 Identities = 193/281 (69%), Gaps = 1/281 (0%) Strand=Plus/Minus Query 45557 AATGTCAGGATACATTCTTTTGCTTGCACATTCTAATGCAAGTTGTTTAATATCATAGTT 45616 ||| ||||||||||||||||| | | || |||||||| | |||||| |||||||| || Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 45617 CGGATCATCTTTATAAAGATTAACACCTTCTTCAACAAACATAACAAGTTTAGGAAAAAT 45676 |||||| | | || ||| || |||| || || | | |||||||| || || || Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676 Query 45677 AGGAGTTATTCCATCACGACCAAGACCTTTAATGCGGTTTTTAAGAATTGCCTTCTGAAT 45736 | ||| || | ||| ||| | |||||| || | | ||||||||||| | || || Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616 Query 45737 CATTCGTTCAGTCCAGTCAGTTCCTGTACCAAATGTAATTGTCACAAAAGGCGTTTGTCC 45796 | || | || |||||| |||||| | ||| |||||||| ||||| || Sbjct 556615 TTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACC 556556 Query 45797 GTTTGAACTAAAGAGAGTATTTACTTCATACTCATAAGCTT 45837 ||||| || | | || || | |||||| || ||| ||| Sbjct 556555 ATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535280219049760