Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq46 131 1e-25 >seq46 Length=4728336 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || || | ||| |||||| ||||| || ||||||||||| || ||||||||| |||| Sbjct 1480160 AAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAAAGTGTGCGTCCGTCT 1480219 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 |||||||| ||||| |||||||| || | |||||| ||| | || | ||||| || || Sbjct 1480220 TCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTATCC 1480279 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||| || | || |||| || | |||||| || || || || | ||||| || Sbjct 1480280 TGAATCTT-AGCTTTGACATTATCAATGGTGTCAGATGGCTCGACTTCGAGGGTGATTGT 1480338 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||||||| ||||| |||||||| |||||| Sbjct 1480339 CTTTCCTGTTAAAGTTTTCACAAAGATTTGCATA 1480372 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| | | ||| || | || || ||| |||||||| || |||||||| || Sbjct 1480372 ACCTCCTCTGAGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATCTGA 1480431 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || || | |||||| |||||||||||||| | |||||||||| | || Sbjct 1480432 TAATGTACGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTGGAGG 1480491 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| |||||| | || || | || | || || | ||| | Sbjct 1480492 GATACCTTCTTTGTCTTGAATTTT-AGCTTTTACGTTTTCAATTGTATCAGAAGGTTCGA 1480550 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| |||||||| ||||| |||||||| ||||| Sbjct 1480551 CTTCCAAGGTGATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCAT 1480599 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||||||| | | |||||||| | ||| || ||||| ||||| ||||| || Sbjct 1481056 ACCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGA 1481115 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | |||||||||||||||||||| | |||||| ||| | || Sbjct 1481116 GAGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGG 1481175 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| | || |||| || | ||||| || || | Sbjct 1481176 AATGCCTTCTTTGTCTTGTATTTT-AGCTTTGACATTTTCAATAGTGTCTGATGGCTCGA 1481234 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || || || |||| ||||| ||||| || ||||| Sbjct 1481235 CTTCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| ||| | || || | ||| || || ||||| || ||||| |||||||| Sbjct 1481285 CCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAA 1481344 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| || |||| || | ||| ||||| ||||||||||| | |||||||||| | || Sbjct 1481345 AGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGA 1481404 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| ||||| || ||| || | || ||||| || | || || | || || Sbjct 1481405 ATACCCTCTTTATCTTGAATCTT-AGCTTTAACATTTTCAATTGTATCAGAAGGCTCGAC 1481463 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || ||||| | || || || ||||||||||| Sbjct 1481464 TTCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||||| || ||||| || ||||| ||||| ||||| ||| Sbjct 1481741 CCACCTCTGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAG 1481800 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | ||| || || || ||||||| | || || ||| |||| Sbjct 1481801 AGAGTTCTACCATCCTCAAGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGG 1481860 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||||||| ||||| ||| |||| || | || || | || || Sbjct 1481861 ATACCTTCTTTGTCCTGGATTTTGGCCTTC-ACATTCTCAATTGTATCTGAAGGCTCAAC 1481919 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 || | ||||| ||||| || || || ||||| |||||||||||||| ||| Sbjct 1481920 TTCCAATGTGATGGTTTTTCCGGTCAAAGTTTTCACAAAGATCTGCATTGTT 1481971 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/158 (74%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 33593 CGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTT 33652 |||| || | ||| ||||| ||||||||||| | |||||||||| | || | ||| |||| Sbjct 1463498 CGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCTT 1463557 Query 33653 TGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTG 33711 | || ||| || | || ||||| || | ||||| || ||| || || | ||| Sbjct 1463558 TATCTTGAATCTT-AGCTTTAACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAGGTG 1463616 Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||||||| ||||| ||||| ||||| || ||||| Sbjct 1463617 ATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCAT 1463654 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||||||| | ||||| | || || || |||||||| ||||| || || || Sbjct 1481513 CCTCCTCTCAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAA 1481572 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | |||||||| || |||||||| | |||||||||| | || Sbjct 1481573 AGGGTTCGACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGG 1481632 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | |||||||| || || || || | |||| ||| |||||| | || || Sbjct 1481633 ATTCCTTCTTTATCTTGGATCTT-TGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTAC 1481691 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || || || ||||| || ||||| ||||||||||| Sbjct 1481692 TTCAAGTGTAATAGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||||||| | || || | || || ||| |||||||| |||||||| || || Sbjct 1570256 ACCTCCTCTCAACCTCAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGA 1570197 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | || |||||||| || ||||| | |||||| ||| | || Sbjct 1570196 AAGCGTACGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGGG 1570137 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||||| ||| | ||| |||| |||||| || || | Sbjct 1570136 AATTCCTTCCTTGTCTTGGATTTTAGCTTTGA-CATTGTCAATGGTGTCCGATGGCTCAA 1570078 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | || || || ||||||||||| Sbjct 1570077 CTTCCAAAGTGATTGTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCAT 1570029 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || || ||||||||||||||||| || | || |||| ||| || |||||||| Sbjct 1479953 TCTTTCTGAATATTGTAATCGGAGAGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAG 1480012 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | | ||||||||| | || | |||||||| || ||||| | || || | Sbjct 1480013 ATGAGCCTTTGCTGATCTGGGGGAATTCCTTCTTTATCTTGGATTTT-GGCTTTTACGTT 1480071 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||| || || || || || | ||||| ||||| || || || || || || Sbjct 1480072 TTCAATGGTATCTGATGGCTCGACTTCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGAC 1480131 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 1480132 GAAGATCTGCAT 1480143 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAA-CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 || ||||| || | ||| |||||| || || || |||||||| |||||||| || || Sbjct 1570483 CCTCCTCT-AAGCCTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGA 1570425 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || | || ||||| ||||| ||||| | |||||| ||| | || Sbjct 1570424 AAGAGTACGTCCATCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGG 1570365 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || || | ||| ||| ||| ||| || ||| | Sbjct 1570364 AATTCCTTCCTTGTCTTGGATCTTAGCCTTGA-CATTCTCAATGGTATCGGATGGTTCAA 1570306 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 1570305 CTTCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCATA 1570256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328698383475840