Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq46 127 5e-24 >seq46 Length=4728336 Score = 127 bits (140), Expect = 5e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || ||||||||||| ||| ||||||||| | ||| Sbjct 1463867 AAAACCTTAACTGGTAAAACAATTACTTTGGAAGTAGAACCATCTGACACAATTGAAAAT 1463808 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| || || |||||||| ||| || || ||||| |||||||| Sbjct 1463807 GTGAAAGCTAA-GATCCAGGATAAAGAAGGTATTCCTCCAGATCAGCAAAGGCTTATCTT 1463749 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| || || | |||||||| | ||| | |||| |||||| | |||||||| || Sbjct 1463748 TGCCGGTAAACAACTTGAAGATGGTCGAACTCTTTCCGACTACAACATTCAGAAAGAATC 1463689 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 || ||||||||||| ||||| || Sbjct 1463688 GACACTTCACCTTGTCTTGAGGCT 1463665 Score = 116 bits (128), Expect = 9e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || |||||||||||||| || || ||||| | || Sbjct 1570044 AAGACTCTTACTGGAAAGACAATCACTTTGGAAGTTGAGCCATCGGACACCATTGACAAT 1570103 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| || ||||||||| || ||| || ||| | ||||| Sbjct 1570104 GTCAAAGCTAAA-ATCCAAGACAAGGAAGGAATTCCCCCAGACCAGCAGAGATTGATCTT 1570162 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||||||||||| | || ||||| | || | | || |||||| |||| ||||| || Sbjct 1570163 CGCCGGAAAGCAGCTCGAGGATGGTCGTACGCTTTCTGACTACAACATCCAAAAAGAATC 1570222 Query 206364 TACTCTTCACCTTGTTTTGAG 206384 || || |||||||||||||| Sbjct 1570223 CACCCTCCACCTTGTTTTGAG 1570243 Score = 114 bits (126), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| |||||| | ||||| || || || Sbjct 1480140 CAGATCTTCGTCAAGACTTTGACTGGCAAAACCATCACTCTCGAAGTCGAGCCATCAGAT 1480081 Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| ||||| || ||| || ||||| |||||||||||| || || || Sbjct 1480080 ACCATTGAAAACGTAAAAGCCAAA-ATCCAAGATAAAGAAGGAATTCCCCCAGATCAGCA 1480022 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| || ||||| ||||| ||||| |||||||||| | || | |||||||||| | Sbjct 1480021 AAGGCTCATCTTTGCCGGCAAGCAACTGGAAGATGGTCGTACACTCTCCGATTACAATAT 1479962 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 |||||||| |||||||| ||||| || ||||||| ||| Sbjct 1479961 TCAGAAAGAATCTACTCTCCACCTCGTACTGAGACTCCGA 1479922 Score = 113 bits (124), Expect = 1e-19 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | ||||| ||||| ||||| |||||||| ||| |||||| ||| | ||| Sbjct 1480584 AAAACATTAACAGGGAAAACAATCACCTTGGAAGTCGAACCTTCTGATACAATTGAAAAC 1480525 Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| || ||| |||||||| |||||||| || || || || ||| | || || Sbjct 1480524 GTAAAAGCTAAA-ATTCAAGACAAAGAAGGTATCCCTCCAGATCAGCAGAGATTGATTTT 1480466 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| || || | |||||||| | || || | |||||||| |||| ||||| || Sbjct 1480465 TGCCGGCAAACAACTTGAAGATGGTCGTACATTATCAGATTACAATATCCAAAAAGAATC 1480406 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 || || ||||||||||| || || Sbjct 1480405 CACACTCCACCTTGTTTTAAGGCT 1480382 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| ||||| |||||| | || || ||| || |||||| | ||| || ||| Sbjct 1481031 ACAGGCAAAACCATCACTCTTGAGGTCGAACCATCCGACACAATTGAAAATGTTAAGGCC 1480972 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || |||||||| || || || || || | |||||||| ||||| Sbjct 1480971 AAGATTCAGGATAAAGAAGGCATCCCACCAGATCAACAGAGGTTAATCTTCGCTGGAAAA 1480912 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||||||| | ||| | | || ||||| | || ||||| || || |||||| Sbjct 1480911 CAGTTGGAAGATGGACGCACTCTTTCGGACTACAATATTCAAAAAGAATCCACCCTTCAC 1480852 Query 206374 CTTGTTTTGAGACT 206387 || |||||||| || Sbjct 1480851 CTCGTTTTGAGGCT 1480838 Score = 111 bits (122), Expect = 4e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || |||||||| || |||||||||||||| || |||||| ||| | ||| Sbjct 1481496 AAGACTCTTACAGGAAAGACCATCACTTTGGAAGTCGAGCCTTCTGATACAATTGAAAAT 1481437 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||||||||| ||||| || ||| || || || || | || || Sbjct 1481436 GTTAAAGCTAA-GATTCAAGATAAAGAGGGTATTCCTCCAGATCAGCAGAGGTTGATTTT 1481378 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || |||||||| | ||||| || | || | ||||||| ||| | |||||||| || Sbjct 1481377 TGCAGGAAAGCAACTTGAAGACGGCCGAACACTTTCCGATTATAACATTCAGAAAGAATC 1481318 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| || || ||||| |||||| | ||| Sbjct 1481317 TACCCTCCATCTTGTATTGAGATTGCGA 1481290 Score = 102 bits (112), Expect = 2e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 206227 TCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGAC 206286 || |||||| | ||| || ||| |||||||| || |||||||| || || || Sbjct 1464053 TCCGACACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGCATCCCACCAGAT 1463994 Query 206287 GCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTAC 206346 || || | |||||||||||||| ||||||||||||||| | ||| | | ||||| Sbjct 1463993 CAACAGAGGTTAATCTTCGCCGGAAAACAGTTGGAAGATGGACGCACTCTTTCGGATTAT 1463934 Query 206347 AACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||| | |||||||| || || ||||| ||||| ||||| || Sbjct 1463933 AACATTCAGAAAGAATCAACACTTCATCTTGTCTTGAGGCT 1463893 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 || ||||| ||||| ||||| || || |||||||| | ||||| || | | ||| | | Sbjct 1463893 AGCCTCAAGACAAGATGAAGTGTTGATTCTTTCTGAATGTTATAATCCGAAAGAGTGCGT 1463952 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||| ||| |||||||||||||| | || |||||| Sbjct 1463953 CCATCTTCCAACTGTTTTCCGGCGAAGATTAACCTCTGTTGA 1463994 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 || |||||||| |||||||| || || ||||| || | ||| ||||| | | ||| | | Sbjct 1480838 AGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCGAAAGAGTGCGT 1480897 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||| ||| ||||| |||||||| | || |||||| Sbjct 1480898 CCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGA 1480939 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||| ||||||| || ||||| |||||||| |||||||| | ||| || || | | || Sbjct 1479922 TCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAGAGTGT 1479981 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||| ||||| ||||| ||||| |||| ||| ||| Sbjct 1479982 ACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGA 1480027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181799570805242