Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq157 152 6e-32 >seq157 Length=245904 Score = 152 bits (168), Expect = 6e-32 Identities = 570/878 (65%), Gaps = 32/878 (4%) Strand=Plus/Minus Query 154149 GCCCGTGCATACATTGAGTATCGCCACGATCGCGATATTGCCCGTGAACAGAAAAGCAAA 154208 || ||| | ||||||||||| || |||||||| ||| | ||||| ||||| || Sbjct 54063 GCGCGTACCTACATTGAGTACCGTCACGATCGTGATGTCGCCCGCGAACAACGCTGCCGT 54004 Query 154209 CTGTTTACGGATATCTCCAGTATGGTGAATCTGTCCAATAAAGAGATCACCAACGAGAAC 154268 || | ||| || | || |||| | | | ||| | | | |||||||||| Sbjct 54003 TTGAATCAGGAAATTCGCGGTCTGGTTGAACAGAGCAACATGGCTCTGCTCAACGAGAAC 53944 Query 154269 GCGAACAAAGACGCAAGGGTTTTCCCGACACAGCGCGATCTGTTGGCGGGTATCGTAGCG 154328 || ||||||||| | || |||| || |||||||| ||| |||| |||||||| || Sbjct 53943 GCCAACAAAGACAGTAAAGTGATCCCTACCCAGCGCGACCTGCTGGCCGGTATCGTTGCC 53884 Query 154329 AAACACT-TCGCACGTAACCACATTCTACCAAAACACATCGTAGAAGCGCATGATTCTGG 154387 || |||| | || | || || || || || || | || || ||||| || Sbjct 53883 AAGCACTATGCCAAGCAA-CATATCCTGCCGCGCGACGTGGTGATTGCCCATGAACGCGG 53825 Query 154388 TGATATCCATTATCATGATCTGGATTACAGCCCGTTC-ACGCCATACACAAACTGCTGTC 154446 ||| || || || || |||||||| ||| ||||||| | | || | ||||| | Sbjct 53824 TGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTC-AACTGTATGC 53766 Query 154447 TGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAAC 154506 | | || | |||| ||| || | || || |||||||||||||||||||| || || | Sbjct 53765 TTATCGACCTTGAAGGCATGTTGACCAAAGGGTTCAAGATGGGTAACGCAGAGATTGAGC 53706 Query 154507 CCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTGCTT 154566 | || ||||| ||| ||||| || | | ||| || |||| ||| ||| | || Sbjct 53705 CGCCAAAATCCATCTCAACCGCGACGGCAGTGACGGCCCAAATCATCGCGCAGGTGGCAA 53646 Query 154567 CTCACCAGTACGGCGGGACAACCTTTGCAAACG--TTGATAAAGTGCTGGCTCCGTATG- 154623 ||| |||||||| || ||| || || || | ||| || | ||||| |||| | Sbjct 53645 GCCACATCTACGGCGGCACCACCATT--AACCGTATCGATGAAATTCTGGCACCGTTCGT 53588 Query 154624 CAGAAAT-GACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATT-TCGTTG-G 154680 || | | |||| ||||||| | ||| | ||| | ||| || || | Sbjct 53587 CACCGCTAGCCATA--AAAAGCACCGGGAAACCGCTGATGAGTGGCACATTCCCGATGCG 53530 Query 154681 ATCGTACATATGCGATGGAAAAGACTGAAAAAGATGTG-TTTGATGCTTTCCAATCGTAT 154739 || | |||||| || || | | ||| | || || ||||| ||| Sbjct 53529 GACG--CCTATGCGCTGTCTCGTACCTAGA-----GTGCTACGACGCCTTCCAGTCGCTG 53477 Query 154740 GAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTTACTATTACT 154799 ||||| ||||| || |||||||| |||||||| || || || || ||||| || || | Sbjct 53476 GAATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGACGCCGTTCGTCACCTTTGGT 53417 Query 154800 TTCGGTACTGGTAC-----GGGAATGTTTGAACGAATGATCCAGAAAGCGATTCTGAAAA 154854 |||| || || |||||| || |||||||| || | || ||| | Sbjct 53416 TTCGACCTCGGCACCAGTTGGGAAT-----CGCGTCTGATCCAGCAATCCATCCTGCGCA 53362 Query 154855 ACCGTATTCGTGGTCTGGGTAAACAAGGTATTACCCCTGTGTTCCCTAAACTGGTCATGT 154914 |||||||| |||||||| ||| | ||| || | |||||||| |||||||| | Sbjct 53361 ACCGTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCCCAAACTGGTGTTCG 53302 Query 154915 TTATGGAAAAAGGTGTAAACATGAATCCTGGGGATCGTAACTATGACATCAAACAATTGG 154974 ||| | ||||| || || ||| |||| |||||||||||||| ||| ||| Sbjct 53301 CTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACATCAAGCAACTGG 53242 Query 154975 CTCTGGAATGCGCTTCGAAACGTATGTACCCAGATATC 155012 | ||||| ||| | || || |||||||| |||||| Sbjct 53241 CACTGGATTGCTCCAGCAAGCGGATGTACCCGGATATC 53204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570009210413520