Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_025416.1 Length=141907 Score E Sequences producing significant alignments: (Bits) Value seq89 100 3e-16 >seq89 Length=3091062 Score = 100 bits (110), Expect = 3e-16 Identities = 355/550 (65%), Gaps = 30/550 (5%) Strand=Plus/Minus Query 102196 AAGCTGTATTTGCGTTTATGGGTGGTATGGAAGAGATACATGCTAAATCTTATAGTCATA 102255 |||| || | | | ||||||| |||||| | || || |||||| |||| |||| Sbjct 2801538 AAGCCGTTTATTCATTTATGGCGATGATGGAACAAATCCACGCTAAAAGTTATTCGCATA 2801479 Query 102256 TCTTTACAACATTACTAAGTAATAAAGAAACAAGTTATTTATTAGATACTTGGGTTGAAG 102315 | ||||| ||||||||| | || ||||||| ||||||||||| | |||||| | Sbjct 2801478 TTTTTACTACATTACTACCTTCTAGTGAAACAAACTATTTATTAGACAAATGGGTTATTG 2801419 Query 102316 AA-AATGACTTTTTAAAAGTAAA--AGCTCAGTTTATTGGTTATTATTATGACCAATTAT 102372 || || | ||| ||| |||| || | | |||||| || ||||| | |||||| Sbjct 2801418 AAGAACCGCATTTGAAATATAAATCAGATAAAATTATTG---ATAATTATCATAAATTAT 2801362 Query 102373 ----TAAAACCTAATCCTACTGTATTTGATAGATATATGGCTAAAGTAGCCAGTGCCTTT 102428 |||| | || | | | |||| ||||||||| ||| | || | || Sbjct 2801361 GGGGTAAA----GAAGCTTCAATTTATGATCAATATATGGCGCGCGTATCAAGCGTATTC 2801306 Query 102429 TTAGAAAGTGCATTATTCTACTCAGGATTTTATTATCCTTTACTTCTTGCAGGTAGAGGT 102488 ||||||| ||||||||||| || || ||||| || ||| ||||||||| |||| Sbjct 2801305 TTAGAAACATTTTTATTCTACTCTGGTTTCTATTACCCATTATATCTTGCAGGACAAGGT 2801246 Query 102489 CAGATGACACAATCAGGAGCTATTATTTATAAAATTACCCAAGATGAAGCTTACCACGG- 102547 | ||||| ||| |||| || || |||||| |||||| || || || Sbjct 2801245 AAAATGACTACATCTGGAGAAATCATCCGTAAAATATTATTGGATGAATCTATTCATGGC 2801186 Query 102548 ---TTCAGCAGTA-GGATTAACAGCTCAATATGATTA--CAATCTTCTAACAGAANNNNN 102601 || | ||| |||| ||| | | ||| |||| || ||||| Sbjct 2801185 GTATTTACTGGTATGGATGCACA-------AAGTTTACGCAATGAACTTTCAGAAAGTGA 2801133 Query 102602 NNNNNNATTAGCAGATAGAGAAACTTATGAATTATTA-AATATTCTTTATACTAATGAAG 102660 | ||||||| ||||| ||| |||||||| || ||| | |||| ||||||| Sbjct 2801132 AAAACAACAAGCAGATCAAGAAATGTATAAATTATTAGAAGATT-TATATAGAAATGAAG 2801074 Query 102661 TAGCGTATACACATAGTCTATATGACCCGCTAGAGTTAAGTGAAGATGTAATTAACTATG 102720 | || ||||| ||| || ||||| | | | || |||||||||| ||||||||| Sbjct 2801073 TTGCTTATACGCATTCACTTTATGATGCTATTGGTCTATCTGAAGATGTACTTAACTATG 2801014 Query 102721 TTCAGTATAA 102730 || ||||| Sbjct 2801013 TTAGATATAA 2801004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453966444098640