Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_025437.1 Length=169062 Score E Sequences producing significant alignments: (Bits) Value seq89 109 6e-19 >seq89 Length=3091062 Score = 109 bits (120), Expect = 6e-19 Identities = 196/284 (69%), Gaps = 7/284 (2%) Strand=Plus/Minus Query 46581 AATGTCAGGATACATTCTTTTGCTTGCACATTCTAACGCAAGTTGTTTAATATCATAGTT 46640 ||| ||||||||||||||||| | | || ||||| || | |||||| |||||||| || Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 46641 CGGATCATCTTTATAAAGATTAACACCTTCTTTAACAAACATAACAAGTTTAGGAAAAAT 46700 |||||| | | || ||| || |||| ||||| | | |||||||| || || || Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676 Query 46701 AGGAGTTATTCCATCACGACCAAGACCTTTAATCCGATTTTTCAGAATTGCTTTCTGAAT 46760 | ||| || | ||| ||| | |||||| || | | | || |||||||||| || || Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616 Query 46761 CATTCG---TTCGGTCCAATCAGTTCCAGTACCAAATGTAATTGTTACAAAAGGCGTTTG 46817 | || | || ||| ||||| |||||| | |||||||||||| ||||| Sbjct 556615 TTTACGGCTATATGT---ATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTG 556559 Query 46818 CCCGTTTGAACTAAAAAGAGTATTTACCTCATACTCATAAGCTT 46861 || ||||| || | | || || | ||||| || ||| ||| Sbjct 556558 ACCATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540860921246240