Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_025460.1 Length=42600 Score E Sequences producing significant alignments: (Bits) Value seq89 93.3 1e-14 >seq89 Length=3091062 Score = 93.3 bits (102), Expect = 1e-14 Identities = 153/215 (71%), Gaps = 7/215 (3%) Strand=Plus/Minus Query 12 ATGATGATATAATTA-GTCCAAGAAAATCTTTAATGCCAGTGTTTTCAAGCATTTTATAA 70 |||||||| | ||| || |||||| || || || | ||| ||| ||||||| Sbjct 2304042 ATGATGATGTGATTTTGTATTAGAAAAGGCTTGATTTCAATATTTAAAAGGGTTTTATAG 2303983 Query 71 AGCTTATAAAAAATA--TAAGGGCaaaaaaaGGGCAGATTTAAGCTAACTTGGAATGTTT 128 | | | |||| || ||||| || ||||||||||||| | ||||||||||| ||| Sbjct 2303982 -GTTGTTCAAAATTAACTAAGGTCAGAAAAAGGGCAGATAGAT--TAACTTGGAATATTT 2303926 Query 129 TCGAGTTTTTGAGTTAGTTCTCTATCCATTCTTTCAGTTACATGAGTATATATGCGAATT 188 || | ||| | |||| | | | |||||| |||| |||| ||| || ||||| |||| Sbjct 2303925 TCAAATTTCTAGGTTAACTGTTTGTCCATT-TTTCTGTTAAATGCGTGTATATTTGAATA 2303867 Query 189 GTTGTTTTTTCATCTACATGTCCTACCCTTTTCAT 223 || |||||||| || ||| || || |||||||| Sbjct 2303866 GTAGTTTTTTCGTCAGTATGACCAACTCTTTTCAT 2303832 Score = 91.5 bits (100), Expect = 4e-14 Identities = 165/236 (70%), Gaps = 9/236 (4%) Strand=Plus/Minus Query 1171 GGAACATAGCTTCTTTTTGTGATTGTTTTGTATTTTTGTTCAAGACAATACTTACACGTT 1230 |||| | || |||||| || || ||| |||| |||||||| |||| || ||| | Sbjct 2303283 GGAATAAAGATTCTTTCTGAGAAATTTTAGTATCTTTGTTCATTACAACACATACTCTGC 2303224 Query 1231 TCCATTTATCTGTGTATGGATCTTTGTACTTCTCGTAGTATCTGTATTTAGTTTCGTTAt 1290 |||||||| |||||| ||||| ||||||| || | | ||||||||||| | Sbjct 2303223 GTCATTTATCCGTGTATAAGTCTTTATACTTCTTATATAAGCGGTATTTAGTTTTGCCTG 2303164 Query 1291 ttttgtttttaaatttttCAATCCACAT-GTTTATACCTCCT----GTAAGAACGTACGT 1345 ||| | |||||||| ||| |||||| | ||| |||||| | |||||||| || Sbjct 2303163 CTTTATCTTTAAATTGTTCTGACCACATAATGTATTCCTCCTTACATTTAGAACGTAAGT 2303104 Query 1346 TC--TGTAAATTTATAAAAAATAATAAGGGTAGGCGG-GCTACCCGAAAAATATTA 1398 || | |||| | || ||||||| |||| || || || ||| ||||| |||| Sbjct 2303103 TCAATATAAAGAT-TAGAAAATAAATAGGGCAGTAGGAACTGCCCAAAAAACATTA 2303049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136196132466888