Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq89 134 9e-27 >seq89 Length=3091062 Score = 134 bits (148), Expect = 9e-27 Identities = 209/296 (71%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 19916 GTTATTAATGAGATTAAAACAAACCCAACATCACGAAGATTAATTGTATCAGGTTGGAAT 19975 || |||||| | ||||||| ||||| | || || ||| || | || | |||||| Sbjct 2013190 GTAATTAATCAAATTAAAAATAACCCTAATTCTCGTAGACATATCATTTCTGCGTGGAAT 2013249 Query 19976 CCTCATGATGTTG---CAGATGTAGATTTACCACCTTGCCATACACTATTTCAATTCTTT 20032 || ||| ||| || ||| | ||||||||| |||||||| | || ||||| | | Sbjct 2013250 CCAACTGAAATTGATACA-ATG--GCTTTACCACCATGCCATACGATGTTCCAATTTTAT 2013306 Query 20033 GTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGT 20092 || ||||||| ||||| |||||| || ||||| |||||||||| |||| | ||| Sbjct 2013307 GTTCAAGATGGAAAATTGAGTTGCCAATTATATCAGAGAAGTGCTGATATATTCTTAGGT 2013366 Query 20093 GTTCCATTTAATATTGCATCTTATGCTTTACTTACACACTTAGTTGCATTAGAATGTGGG 20152 || |||||||| |||||| |||| |||| | || |||||| | || ||||||||| Sbjct 2013367 GTGCCATTTAACATTGCAAGTTATAGTTTATTAACGCACTTAATAGCTAAAGAATGTGGT 2013426 Query 20153 CTTAATGTTGGTGAGTTTGTTTGGGTTGGTGGTGATTGCCACATTTACTCAAATCA 20208 | | || || || ||||| | ||||||| || |||||||||||||| Sbjct 2013427 TTAGAAGTCGGAGAATTTGTGCATACTTTTGGTGATGCTCATATTTACTCAAATCA 2013482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319005749095502