Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq46 104 2e-17 >seq46 Length=4728336 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||| ||||| ||| | ||||| |||||| || || || |||| | Sbjct 1479950 GATTCTTTCTGAATATTGTAATCGGAGAGTGTACGACCATCTTCCAGTTGCTTGCCGGCA 1480009 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | || |||||||| || || ||||||||||| ||||| ||| | Sbjct 1480010 AAGATGAGCCTTTGCTGATCTGGGGGAATTCCTTCTTTATCTTGGATTTTGGCTTTTACG 1480069 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | ||||| ||||||| || | ||||| ||||||| ||| || Sbjct 1480070 TTTTCAATGGTATCTGATGGCTCGACTTCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTG 1480129 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 1480130 ACGAAGATCTGCATG 1480144 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||||||||||||| | || || |||||| || |||||||||| | Sbjct 1463689 GATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCGACCATCTTCAAGTTGTTTACCGGCA 1463748 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | || ||||||||||| || ||||||||||| || || ||||| Sbjct 1463749 AAGATAAGCCTTTGCTGATCTGGAGGAATACCTTCTTTATCCTGGATCTTAGCTTTCACA 1463808 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | || || ||||| | || | ||||||||||| | ||||| Sbjct 1463809 TTTTCAATTGTGTCAGATGGTTCTACTTCCAAAGTAATTGTTTTACCAGTTAAGGTTTTA 1463868 Query 132110 ATGAAAATCTGCAT 132123 | || || ||||| Sbjct 1463869 ACAAAGATTTGCAT 1463882 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | || || ||||||||||| || || | |||||| ||| || Sbjct 1481074 AACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGAGAGCGTACGCCCATCCTC 1481133 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||| ||||| |||| | | || || | ||| || ||||| || ||||||||||| || Sbjct 1481134 GAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTG 1481193 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||| | | ||| | ||| || | ||||| ||||| | || | || || Sbjct 1481194 TATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGACTTCTAAAGTTATGGTCTT 1481253 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || |||||||| | ||||| ||||| Sbjct 1481254 TCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| || | || | | |||| |||||||||||||| ||||| | ||| || Sbjct 1481521 CAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAAAGGGTTCG 1481580 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| |||||||| || | | || | | ||| |||||||| || || ||||| Sbjct 1481581 ACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATTCCTTC 1481640 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| || ||| || | | ||| | ||| |||| ||||| ||||| | || Sbjct 1481641 TTTATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACTTCAAGTGT 1481700 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || || || | ||| |||| ||| |||||||| Sbjct 1481701 AATAGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||| | || | | | || ||||||||||| |||||||| | || || ||| Sbjct 1480843 CAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCGAAAGAGTGCGTCCATC 1480902 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | |||||| || | |||||| | |||||||||||| || |||||||||||||| Sbjct 1480903 TTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCTTTATC 1480962 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || || | | ||| | || |||| || || || || | || | || Sbjct 1480963 CTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGACCTCAAGAGTGATGGT 1481022 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || |||| ||| |||| ||| || ||||| Sbjct 1481023 TTTGCCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| | ||| || | ||| | | | || ||||| |||||||| || ||| | || Sbjct 1481291 CGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAAAGTGTT 1481350 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||||| || || || || | | | || | | ||| ||||||||||| || || Sbjct 1481351 CGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCC 1481410 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 |||||||| ||| || ||| | | ||| | ||||| | ||||| ||||| | Sbjct 1481411 TCTTTATCTTGAATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCTCGACTTCCAAA 1481470 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 || | || || || || ||||| || | ||| ||||||||| || Sbjct 1481471 GTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCATGCCT 1481515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476602847388720