Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_026016.1 Length=43748 Score E Sequences producing significant alignments: (Bits) Value seq89 179 1e-40 >seq89 Length=3091062 Score = 179 bits (198), Expect = 1e-40 Identities = 238/329 (72%), Gaps = 1/329 (0%) Strand=Plus/Plus Query 30952 TTTGAGTTTTTCGGTTCTAAAAATTGAATACTATCAGCAATAACTTCCGTAACGTATACA 31011 ||||| ||||| ||||| | ||||||| |||||| || ||||| || || | ||| Sbjct 140307 TTTGA-TTTTTAGGTTCAAGGAATTGAACGCTATCACAAACTACTTCAGTTACAAAAACA 140365 Query 31012 CGTTGACCTTCCTTATTTTCATAGTTCCGCGTTTGTAACCTACCATCTACGCCCGCCAAC 31071 || | ||||| | ||||||||| | || | ||| | | ||| || |||||||| || Sbjct 140366 CGACGTCCTTCTTGGTTTTCATAGCTACGTGATTGAATGCGACCGTCAACGCCCGCTAAA 140425 Query 31072 GATCCTTTAGATAGGTATTTATTAACGTTCTCTGCTTGTTTTTTAAATACGATGATATTA 31131 ||||| | | ||| ||||| || || |||||||||||| |||| |||| |||| Sbjct 140426 CTACCTTTGAACAAGTAGTTATTTACATTATCTGCTTGTTTTCTAAAAACGACACAATTA 140485 Query 31132 ATAAAGTCTGCCTCGCGCTCTCCTTGTGCATTCGTAAATGTGCGGTTAACTGCTAATGTG 31191 || || ||||| ||||| || ||||| ||||| ||||| || ||||| ||||||| || Sbjct 140486 ATGAAATCTGCTTCGCGTTCCCCTTGCGCATTTGTAAACGTACGGTTTACTGCTAGAGTA 140545 Query 31192 AATGATGCTACATTTACACCACTTTGAGTGGTTCTTAATTCTGGGTCTCTAGTTAAACGA 31251 || | || ||| | || || | || ||||| ||||||| ||| | ||||||||| Sbjct 140546 AAAGTCGCAACACTCACGCCTGAGGGTGTTGTTCTATATTCTGGATCTTTCGTTAAACGA 140605 Query 31252 CCAACTAATATTGTTCTGTTTAGCATTTA 31280 || ||||| | ||| |||| |||||| Sbjct 140606 CCGACTAAAACAACTCTATTTATCATTTA 140634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139869671306040