Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq81 105 1e-16 >seq81 Length=2317497 Score = 105 bits (116), Expect = 1e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || |||||||||||||||||||| ||||| || | | | | || ||||| | | Sbjct 2277867 ATATACAAGGTGCTCAAGCAGGTCCACCCGGACACAG--GCGTC-TCGTCCAA---GGCG 2277920 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| || |||||| || || |||||||| |||| || |||| ||||||| Sbjct 2277921 ATGAGCATAATGAACAGCTTGGTGAACGACATATTCGAACGGATCGCGGCCGAGGCGTCA 2277980 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||||| | | || ||||||||| | || || | || ||||| |||||||||||| Sbjct 2277981 CGCCTTTCCCTCTACAACAAGCGTATGACAATATCAAGCCGTGAGATACAGACCGCCGTG 2278040 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | || || ||| ||| || ||||||| ||| || ||||||||||| || Sbjct 2278041 AGGCTCCTCCTGCCCGGTGAGCTGGCCAAGCATGCAGTCTCCGAGGGTAC 2278090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177675974523124