Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq46 87.8 2e-12 >seq46 Length=4728336 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | | |||||| || | || | || || || ||||||||||| |||| Sbjct 1463654 TTCCACCTCTGAGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGG 1463713 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | ||||| | || || || || ||||| ||||| || | || ||||| || | || Sbjct 1463714 AAAGAGTTCGACCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAG 1463773 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | || || ||| |||||| |||| | || | | ||||| | ||| | Sbjct 1463774 GAATACCTTCTTTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCTA 1463833 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| || || |||||||| || || ||||| ||||| || ||||||| Sbjct 1463834 CTTCCAAAGTAATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCATTC 1463884 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||| ||||| | | |||| | || || || ||||| || || || Sbjct 1481777 TCCTTTTGAATGTTATAATCCGAGAGAGTTCTACCATCCTCAAGTTGCTTGCCAGCGAAA 1481836 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || || ||||| | || | | || |||||| ||| || ||||| | | Sbjct 1481837 ATCAGCCTTTGTTGGTCTGGCGGGATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTC 1481896 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || | || || |||| ||||| ||||| || ||||||||||||||| Sbjct 1481897 TCAATTGTATCTGAAGGCTCAACTTCCAATGTGATGGTTTTTCCGGTCAAAGTTTTCACA 1481956 Query 35726 AATATCTGCATT 35737 || ||||||||| Sbjct 1481957 AAGATCTGCATT 1481968 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | ||| | || | ||| | || || || || ||||| ||||| | Sbjct 1480599 TTCCACCACGGAGCCTTAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCAG 1480658 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || ||| | || || | ||||||||| ||||| || | || ||||||||| | | Sbjct 1480659 AAAGAGTGCGCCCATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 1480718 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATTCC 35686 | | | || || ||| ||| ||| |||| | | || | | ||| || | ||| Sbjct 1480719 GGATACCTTCTTTATCC-TGAATTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCG 1480777 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | |||||||| || || || |||||||||||||| || ||||| Sbjct 1480778 ACTTCAAGAGTGATCGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450785699842160