Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_027353.1 Length=167063 Score E Sequences producing significant alignments: (Bits) Value seq89 102 9e-17 >seq89 Length=3091062 Score = 102 bits (112), Expect = 9e-17 Identities = 194/282 (69%), Gaps = 3/282 (1%) Strand=Plus/Minus Query 42181 AATATCAGGATACATCCTTTTGCTTGCACACTCTAGAGCAAGCTGCTTAATATCATAGTT 42240 ||||||||||||||| ||||| | | ||||||| || | || || |||||||| || Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 42241 CGGATC-GTCTTTGTAAAGATTAACACCTTCTTCAACGAACATAACAAGCTTAGGAAAAA 42299 |||||| || |||| ||| || |||| || || | | ||||| || || || | Sbjct 556735 CGGATCTTTCGAACTAAA-ATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGA 556677 Query 42300 TAGGAGTTATCCCATCACGACCGAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAA 42359 | | ||| || | ||| ||| | |||||| || | | | || |||||||||| || | Sbjct 556676 TGGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGA 556617 Query 42360 TCATTCGTTCAGTCCAGTCAGTTCCTGTACCAAATGTAATTGTTACAAAAGGAGTTTGTC 42419 | | || | || |||||| |||||| | |||||||||||| ||||| | Sbjct 556616 TTTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGAC 556557 Query 42420 CGTTTGAACTAAAGAGAGTATTTACTTCATATTCATAAGCTT 42461 | ||||| || | | || || | ||||||||| ||| ||| Sbjct 556556 CATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534464233350160